Selaginella moellendorffii: SELMODRAFT_100916
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Entry
SELMODRAFT_100916 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_100916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_100916
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
SELMODRAFT_100916
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
SELMODRAFT_100916
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
SELMODRAFT_100916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
PTP-SAK
PTP-NADK
Y_phosphatase
DNA_ligase_A_M
FERM_F1
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
9636414
NCBI-ProteinID:
XP_002974489
JGI:
100916
UniProt:
D8RTN6
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
GWIDCPPFGEPVLRFVPSKVFLGEAYNAAIEPGKRYSWKRILRQHKDVGLIIDLTNTTRY
YSANEVTRAGLSHFKIPCKGRNEVPDAEAVNTFVYETHRYLQRSKTSRVLVHCTHGFNRT
GYMIVNYLVRYCGLPVTQALAKFAAARPPGIYKKSYIRKLYALYHDPTPFAAPAVPDWKR
LDLNGTVDDDDGDDEEDDPTLDRQENAAPMTNDDVLGDAISSEEQIELQRLCLSLLDLAS
QSRNLSFPGSHPVSLDRSKLQLLKQHYYFATWKADGTRYMMLILSYGCYLIDRKFEFRRI
QMRFPHPRKDSPLPVHHMTLLDGEMVIDKHPETGKLERRYLIYDMMVVNAESLVKKPFSQ
RFHGIESDVIRPRHNDAGSSGYLYKDEEFRVRRKNFWPLSSTKLLFQKLIPGLSHRSDGL
IFQGFEMPYVCRTSDSLLKWKFPSLNSVDFYLQRSGDTFTLSLLEKGNHQVLPGASVSFD
DSVDPSTLENKVIECSWNNERQSWEFMRLRPDKPLANAFNTYRKVFNSIKDNITQEELVE
EIDRTVKLPMYKEKDKQFLK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ggctggatcgattgtcctccatttggcgagcctgttctcaggtttgtcccatctaaagtc
tttcttggggaggcctacaatgctgccatagagccggggaagcgatatagctggaagcgt
atcctacgacagcacaaggatgttggtttgataatcgatctcaccaacacgaccagatac
tactccgcgaacgaagtgacgagagctggtctcagccatttcaaaattccatgcaaaggt
aggaacgaagtccctgacgctgaggctgtaaatacttttgtctatgagacacatcgctac
cttcaaagatccaagacctcacgcgtcctcgttcactgcacgcacggatttaacaggacc
gggtacatgattgtcaactatctcgttcgctattgcggcctccccgtgactcaggctctc
gcaaaattcgccgctgcaaggcctcccggtatctataaaaagagctacattcggaaatta
tatgcgctctaccacgaccccactcctttcgctgctcctgctgttcctgattggaaaagg
ctcgatttgaatggtaccgtcgatgatgatgacggcgatgacgaggaggacgaccctacg
ctagaccggcaagaaaacgctgctccaatgacaaacgatgatgttcttggcgatgcaatt
tcaagtgaggagcaaatcgaactccaacgattgtgtctgtcgttgcttgacctggcttca
caatccagaaacttgtcttttccaggctcacatcccgtgtcgctggacaggagcaagctt
caactgctgaaacaacattactattttgcaacgtggaaagcggatggaaccagatacatg
atgctcatactttcttatggctgctaccttattgataggaagtttgagtttaggagaatc
cagatgcggtttcctcatcctcgaaaggactctcctttgcccgtgcatcatatgacgctc
ctagacggagaaatggtgattgacaaacatccagagacggggaaactggagaggaggtac
ctcatatatgacatgatggtcgttaacgccgagtcactcgtcaagaaacccttctcgcaa
agatttcatgggatagaatcggacgttataaggcccagacacaatgacgcgggctcaagt
ggctatctttacaaggatgaagaattcagagtccgtaggaaaaacttttggcccctttcg
agcacaaaactgcttttccagaagctcattcccggtctttcgcaccgatcagatggactc
atcttccagggatttgagatgccatatgtttgccgaacgtcagatagtttactgaagtgg
aagtttcccagtttaaactcagtggatttttacctccagagatcaggggatacttttact
ttgtcgctgttagagaaaggaaatcatcaagtgctcccgggagcttcagtaagttttgat
gactcggttgatccctcgacgctggagaacaaggtgatcgagtgctcgtggaacaacgag
aggcaatcctgggaattcatgcgattgaggccggacaagccgcttgcaaacgcgttcaac
acgtatagaaaggtattcaatagcatcaaggacaacatcacacaggaagagctagttgag
gagatcgacagaacggtcaagctccccatgtacaaagaaaaggacaaacagtttctgaag
taa
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