Selaginella moellendorffii: SELMODRAFT_101676
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Entry
SELMODRAFT_101676 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_101676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_101676
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_101676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Utp13
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
9637359
NCBI-ProteinID:
XP_002974590
JGI:
101676
UniProt:
D8RTY2
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MTPLGYKKNFRATPALQLFYTGGPLRLAPDASFLACACNDEVKIVDIATGTIRKSLAGDS
EAITALAISPDGNTLFAASRSLQVRIWDLATGTLCRSWKAHDGSVTDMDVSVSGLLATAS
IDRSIRVWDVDGGFCTHAFRGHKGIVTKVIFHPDPHRLLLFSCGDDATVRVWDLVTKKSA
ALLEKHFSTVTSLAVSANGWSLISGARDKVLNIWSLRDYSHEGTVPVFEAVEAICVVPDG
CNLPGSSIQKKKGSKPNVLTVGEFGVIRVFSAEGGNCVYKQNSSDVSIATEDADETKRGF
TAAYILPDAKGVLCITYDHRLFFYEPFLVDDKQRDLRISKRLIGCNDEITDLRYVGSDET
SLAVASNVEQVRIYDLSSMACTQELTGHTDIVLCLDTCLSSQGKPVLASGGKDHTARLWD
VTSGKCFAMCTGHSAAVGAIAFSKKKRSFLLTGSRDRSIKFWDFQFVIDDNQQDRVAKLS
CIRSAAAHDKDINSLSVAPNDSLLCSGSQDGTARIWKLPELTLATTLKGHKRGVWSVEFS
PIDQCVLTSSGDKTIRIWALSDGSCLKTFEGHTASVLRASFLSRGTQIISSGADGLVKLW
TIKSNECINTFDQHNDKIWALAVNSNNESFATGGGDALVTLWEDCTASDEEEAARQEAEE
ALKDQDLANALADTDYDKAVQLAFELRRPFKLLGVFTDLGAFGRSGTDATLASLLKKLDS
AYLRLLLEYIREWNSKPKFCYVAQHVLHCVFNVFPASEIVEVPGISELLEGILPYTQRHF
NRIGRLEQSCYLADYTLACMSVLDPSDQLPGLAGEIHAKKKQKL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttgggatacaagaagaatttccgggcgacgccggcattgcagctcttctac
acgggagggccgctgcgtctcgcgccggatgcctcattccttgcctgcgcttgcaacgat
gaggtcaagatcgtcgacatcgccaccggcaccattcgtaagtctctggcaggcgattcc
gaggctatcacagcattggcgatcagtcccgatggaaatacgctcttcgcggccagcagg
agcttgcaagtgaggatctgggatctcgccactggcacgctttgtcgatcgtggaaggca
cacgatgggtctgtgactgacatggacgtatcggtgtcgggacttctagccacagccagc
attgatcgaagcattcgagtgtgggatgtggatggaggattttgtacgcacgcgttccgg
gggcacaaaggcatcgtcacaaaagtgattttccatccggacccgcatcgtttgctgctc
tttagttgcggtgacgatgccacagtacgggtgtgggatctggtgacgaaaaaatctgcc
gctcttttggagaagcatttctcgactgtcaccagcttggcagtttcagcgaatggctgg
agcttgattagtggtgcgagggataaggttctaaatatttggagtcttcgtgactatagc
catgaaggaactgtaccggtatttgaagcagtggaagcaatctgtgttgttccagatggc
tgcaatctaccaggaagctctatccagaagaagaagggctcgaagccgaatgtgttaact
gttggcgagtttggagttatccgtgttttctctgccgaaggtggaaattgcgtatacaaa
caaaattcttccgacgtttccatagcaacagaagacgcagacgagacaaagcgtgggttt
actgcggcatatattcttccagatgcaaaaggagttctttgcatcacgtacgatcaccgc
cttttcttttacgagccatttctagtggacgacaaacaaagagatttgcgcattagcaag
cgccttataggttgcaacgatgaaataaccgatttgagatatgttggaagcgacgagact
tctcttgccgtggccagcaacgtggagcaggttcgcatatacgacttaagctccatggcc
tgcacacaagagctcaccggtcacacggacattgtcctttgtctggacacttgtctttca
tctcaaggaaaaccagtgctagcttcgggtggtaaggaccatacggcgagactttgggat
gttacctctggtaaatgtttcgcgatgtgtactggccacagtgctgcagtcggagccatt
gccttttcaaaaaagaaacgcagttttctgctgacaggaagcagggatcgctctatcaag
ttctgggactttcagtttgttatagatgacaatcaacaagatagagttgccaagctttcg
tgtatccgttctgccgctgcacatgacaaagatatcaactcgctttctgtggctcccaat
gacagccttctatgcagcggatctcaggacgggacagctcgtatttggaagctcccggaa
ctcactctagctacgactttgaaagggcacaaacgaggcgtctggtctgtagagttttct
cctatcgaccagtgcgtattaacgtcctccggcgataaaactatacgaatatgggcactc
tccgacggttcttgtctaaaaacatttgagggccacaccgccagtgttttgagagcttca
tttctatctcgcggaacacaaataatttcttctggtgcggatggactggtaaagctatgg
actatcaagagtaacgagtgcataaacacttttgatcaacacaacgacaagatttgggcc
ttagccgtgaacagcaacaatgaatcgtttgctactggagggggtgatgcattggtcact
ttgtgggaggattgcaccgcctctgacgaagaggaagctgctagacaagaggccgaggaa
gctctgaaagaccaggatttagcgaatgccctcgcggacacggattatgacaaagcggtt
caactggcattcgaactaagacgaccttttaaactccttggagtttttacagatctcggt
gcttttggcagatctggcacagacgcaacactagcctcgcttttgaagaaactcgacagc
gcatacctgcgtctactcttggaatacatccgcgaatggaattcgaagccaaagttttgt
tatgttgcgcagcatgtgttgcactgcgtattcaacgtttttccagcgtccgaaatagta
gaggttccagggatatcggagcttttggaaggcattttaccttatacacaacggcatttt
aataggataggcaggctggaacaaagctgttaccttgcggactatacgttggcatgcatg
tcagtgttggatcccagtgaccaattgccaggacttgccggagagatacatgctaagaag
aagcaaaagttgtaa
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integrated database retrieval system