Selaginella moellendorffii: SELMODRAFT_101752
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Entry
SELMODRAFT_101752 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
smo
Selaginella moellendorffii
Pathway
smo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SELMODRAFT_101752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_101752
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SELMODRAFT_101752
Hops complex
SELMODRAFT_101752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
9637681
NCBI-ProteinID:
XP_002974680
JGI:
101752
UniProt:
D8RUG6
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MAVSVAAEWSAIANRYYRKQEIYRMAWHNVELSGHKVACARFGGMIAIIRDDTKIVRLRS
EPARPKLLIFRSSGLLVASITWDRPGGRLIAMGWSDEEILHCVMQDGSVFRYDVHGKLLP
DKVWFGQECWDQGIMECIIWGNGIVCLTEANAVFCIPDLGSPQFVKLTQLTLEDPPHCMA
IIEPQHTVSGSVEVLLAVESTVMVVDGGSIQDQGTTIGPLGKMVASPNGSYVACFTHDGR
LLVVTSDFSKTISEFDTQSALPPEQLIWCGMDSVLLYSDDSVLMVGPYGDWTKYTYDEPV
VLIPECDGVRILSNTFMEFLQRVPDTTVSIFSIGSTSPGAMLYDAYDHFAKRNAKADESI
RMVGSSIPDAVEACIDAAGQEFRMELQDTLMRAAVYGRTFCRRFSKTRIRETCKTLRILN
GVRDPNVGIPLTLQQLKVLTLPVLIERLVNEHKHLLAIRMSEYMGLSPETVVVHWAGAMI
TAATSVPDPELCNLLLEKLKMYSVSYAAIAAHAYRNGRRTLAALLLEHEPRSSEQVPLLT
SMGEEEKALGKAIKSGDTDLVYFTLFHLWQKKSPSEFTRAVQDKPLARNLFIAYARQNEP
DVLKKFFASIGQLHRVGELLLWEAWAQSKNPVTRQGSPLQGPRIRLIEEAQRLFSHSKEH
DFEAKACDEQARLLKIQHELEAKTGKAIFVDTSVSDTIRTCIVLKNHREAQRIRVEFKVV
PDKRFYWLKILALAYIKDWDALEKFSKERRPPVGFKPFVEACLQEGQTSEALKYIQKLSD
PEEKAEAYAQAGMAKEAAEVAAQAKDSEILGRLKLTFGQSTTAAALFDSIRDRLSLQGG
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccgtggcagcggaatggagcgccatcgccaacaggtactaccggaagcag
gagatctatcgcatggcgtggcacaatgtggagctgagcggccacaaggtagcgtgcgcg
cgattcggggggatgatcgccattatcagggacgacaccaagatcgtccggctccgatcc
gagccagcgcgccccaagctcctgatatttcgatcctccggcctgctggtcgcatcgata
acctgggaccggcccggcggccgattgatcgccatgggatggtccgacgaagaaatcctc
cactgtgtgatgcaagacgggagtgtgtttcgatatgacgtccacgggaagctgctaccc
gataaggtctggtttggacaggaatgctgggatcaagggatcatggaatgcatcatctgg
ggaaatgggatcgtctgcctcaccgaggccaacgcggtgttttgcatcccggatctcggc
tccccgcagttcgtgaagctcacgcagctcactctggaagatcctcctcactgtatggcg
atcatagagccccagcacacggtgtcggggagtgtggaggttttgctcgcggtggagtcg
actgtgatggtggtggatggcggatccatccaggatcaagggacgacgataggaccgctc
gggaagatggtagcttctcctaacgggagctacgtcgcgtgcttcactcacgatggacgg
cttctggtcgtcaccagtgacttttcaaaaaccatctcggaattcgacactcagtctgct
ctaccgcccgagcagctcatatggtgtggaatggacagcgttttgctctactccgacgac
agtgtgctcatggttggtccttacggcgattggaccaagtacacttacgacgagcctgtc
gtgcttattcccgagtgtgatggcgtccgaatcctgtccaacacgttcatggagtttctc
cagcgggtgccggacacgacggtgtctattttttcgattgggagcacgtctccgggggca
atgctctacgatgcttacgaccacttcgcgaaacgcaatgccaaggccgatgaaagtatc
cgaatggttggttcttctattcctgacgctgttgaagcgtgtatagatgctgctggacaa
gagtttaggatggagttgcaagacacgctaatgcgtgccgcagtttatggtagaactttc
tgcagacgcttctcgaagacccgcatacgtgaaacgtgtaagacattacgaatattgaat
ggcgtaagggatccaaatgttggcattcccctgacgctgcaacagttgaaggttttaact
ttgccagttcttatcgagcggcttgtgaatgaacacaagcacttacttgccatcaggatg
tcggagtacatgggtcttagtccagaaacagttgtagttcattgggcaggcgcgatgatt
accgcggccacctcagtaccagacccagaactatgcaaccttctactggagaagctgaaa
atgtattctgtgtcatacgctgcaattgctgctcatgcttacagaaatggccggcgaact
ctggctgcactgcttctggagcacgagccacggtcttccgaacaggttccccttttgacg
agcatgggagaagaggaaaaagctttggggaaagccatcaagagtggagatacagacctt
gtttacttcacgttatttcatctatggcaaaagaaatcaccgtcagagtttacacgtgct
gttcaagacaagcctcttgctcgcaacctttttatcgcctatgcgagacaaaatgaaccc
gatgttttgaagaagttcttcgcatcaattggacaacttcatagggttggcgagcttctg
ttatgggaagcgtgggcgcaatccaaaaatcctgtcactcgacaaggatctcctcttcaa
ggccctcgaattcgtcttatagaagaagctcaacgcctgttttctcacagcaaggagcac
gactttgaggcgaaagcttgtgacgagcaagcacggctactgaagatccagcacgaacta
gaagcaaaaactggcaaagcgattttcgtggacaccagtgtcagtgatacgattcggaca
tgcattgttttgaaaaatcaccgagaggcgcaaaggattcgtgtcgaattcaaggtagtc
ccagacaagcgattctattggctcaagattctggcgcttgcatacatcaaggactgggac
gcgctcgaaaagttttcgaaagagagaaggccgccagttggatttaagcccttcgtcgaa
gcttgcctacaagaaggccagacctccgaggcactgaagtacatccagaagctctcagat
cccgaagagaaggccgaggcgtatgctcaagctggaatggccaaagaagcagcggaagtg
gcggcgcaagccaaagacagcgagattcttggccgtctcaaacttacattcggccaaagc
accaccgccgccgccctgtttgattcgattcgcgatagattgtctctccaaggaggctaa
DBGET
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