Selaginella moellendorffii: SELMODRAFT_103116
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Entry
SELMODRAFT_103116 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06965
protein pelota
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_103116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_103116
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SELMODRAFT_103116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
9629951
NCBI-ProteinID:
XP_002975325
JGI:
103116
UniProt:
D8RWD8
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MKLVKKRIAADGSGSVKLVPEEDDDLWNAYNLIAKDDQVSAVTMRKVQRENSSGGRDAER
VRLKLEVLVEATEFDNIASVLRIRGKNLTENDHVKLGAYHTLEIDLQRAFVLTKTIWDNW
ALELLKNATDPTANADVVAVLIDEGLAHICLVGQNMTTIKARVEASIPRKRGAAIAGYDK
ALNKFFENVFQALVRSVDFTLIRCIILASPGFTKDQFFDYINLESTRREIRAIIENKSKF
ILAHSSSAYKHSLKEVLGSPSVASRIKDTKAAQEVRALEQFFNMLSTDPLRATYGPAHVS
AAHDRFAVQTLLITDALFRNADIPTRTRYVELVESVKEKGGNVHVFSSMHVSGEQLAQMT
GIAAILRYPLPDLEDLEV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaagaagaggatcgccgccgatggctccggctccgtcaagctcgttcca
gaggaagacgacgatctctggaatgcctataatctcattgcaaaggatgatcaggtctcc
gccgtcacaatgagaaaggtacaacgtgagaattcaagcggtggaagggacgcagagagg
gtccgattgaaactagaagttcttgtggaggcaaccgagttcgacaatatcgcttcggtc
ctgcgcattcgtggcaaaaatctcactgaaaacgaccatgtcaagctcggtgcgtatcac
actctggagatcgacctccaaagagcctttgtgctgaccaagactatatgggacaactgg
gctctggagctactaaaaaatgctaccgatcctactgcaaatgccgatgtagtagcggtg
ctgattgacgaggggctagcacacatctgccttgtaggtcaaaacatgacaacaatcaag
gcacgtgtggaagcctctattcctcgcaaacgtggtgcagcgattgccggatatgacaag
gcgctgaacaaattcttcgagaacgtatttcaggcgctagtaagaagcgtagacttcact
ttgatccgctgcataatacttgctagtcctggatttacgaaggaccagttctttgattac
atcaaccttgagagcaccaggagggagatcagggctatcattgaaaacaaatcgaagttc
attctagctcactcatcatccgcctacaagcactcacttaaagaagtccttggctcgccc
tctgttgcttctcgaatcaaagatacaaaagcggcccaagaggtccgggccttggagcag
ttcttcaacatgctatctacagaccctctgcgagcgacttatggccccgctcatgtgtca
gcagcgcacgacagattcgccgtccagacgcttctcatcactgacgcactcttcagaaac
gcggacattccgacgagaacaaggtacgtcgagctcgtcgagtcagtgaaagaaaagggt
ggaaacgtccacgtcttctcctcgatgcacgtctccggcgaacaactggcgcaaatgacc
ggcattgccgccatcctccgctatcccctccccgacctcgaggacctcgaagtataa
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