Selaginella moellendorffii: SELMODRAFT_104715
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Entry
SELMODRAFT_104715 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14571
ribosome biogenesis ATPase
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_104715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_104715
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SELMODRAFT_104715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_14
TIP49
RNA_helicase
NPHP3_N
AAA_2
AAA_17
AAA_33
Mg_chelatase
AAA_28
nSTAND3
Rad17
IstB_IS21
NB-ARC
Vps4_C
ATPase_2
AAA_18
Parvo_NS1
ABC_tran
AAA_7
Viral_helicase1
NACHT
TniB
AAA_23
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
9645869
NCBI-ProteinID:
XP_002975982
JGI:
104715
UniProt:
D8RYE6
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MPQNVSFKDFGGLGDAMDVIVEFIFPVVNPDVVDAVGMEHMKALLLHGPPGCGKSLLAEA
IANEASVPFFKVSAPEVVSGTSGESEAKLRTLFSEAFRVAPAIIFIDEVDAICSKRESAQ
REMERRIVTQLMVCMDEIDYAPRGSESEGGDSNKLRRLLVIAATNRPEALDQALRRRFDR
EICLKVPDEKARLQILTVLASKLRLDGEFDFKAIARRTPGFVGADLKVLTKEAGVAAIRR
IAAKRKAAPAENEAENVWWRRAWTPEELQELRVTMDDFEVAIKKVVPSTKREGFTEIPNV
SWEDVGALETVREELEFLICSRVKHPEDYETLNFSDSGFLLYGPPGCGKTLVAKAVANAA
GANFIYIKAGELFNKYVGESERAVRQLFSRARDCSPCLIFFDEIDALAPGRGSEANAATD
RVVNQLLVEMDGLEQRKCVFVIGATNRPNMIDTALLRPGRLGKRIYIPLPDAQGRESILR
ALLRCLPLAADVDMAAIAQHELCEGFTGADLHGLVQEACGVALRERIPLWRASNGQAPQS
GVTLTQKHFAEALNRVEPSVSAGVRIKVTIFSLLRVITHL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaatgtgagcttcaaagattttggaggccttggcgatgccatggacgtgatc
gtggagttcatattcccggtggtaaatcccgacgtggttgatgcggtggggatggagcat
atgaaagctttgcttcttcatggacctcctggctgtggaaaatctctgctggccgaggcc
attgcgaatgaagcgagcgttcccttcttcaaggtgtcagctccagaagttgtgtctgga
acatcaggtgaatcggaagcaaagctaagaacactgttttccgaggcttttagagtcgcc
ccagccatcatattcatcgacgaggtcgacgctatttgctccaagagagagtctgctcaa
agagagatggagcggcggattgtgacgcagttgatggtctgcatggacgagattgattac
gctccacgaggctccgaaagtgaaggtggtgacagtaacaagctgaggcgcttgctcgtg
atagcagctacaaaccggcctgaagctctggatcaggctctcagacgacgtttcgatcgc
gagatctgtttgaaggtgcctgatgagaaagctaggctgcaaatattgacagtcctcgcc
agcaaacttcgccttgatggagagttcgacttcaaggccattgcaaggcggacgccgggt
tttgtcggtgcggatctgaaagttcttacaaaagaagctggagttgcggctatcaggagg
attgctgcaaagaggaaggcagcgccagcggaaaacgaggctgaaaatgtgtggtggaga
cgtgcttggactcccgaagagctccaagaactgcgggttacaatggacgacttcgaggtt
gctataaagaaggtagtgccatccacaaaacgagaggggttcacggagattccaaatgtg
agctgggaggatgtgggagctttggaaactgtgcgtgaagagctcgagtttttaatctgc
agccgtgtgaagcatcctgaggactacgagactttaaatttctcggacagtggatttctt
ttgtatgggccgcctggatgcggcaagactttggttgcaaaggccgtggccaacgctgct
ggagccaacttcatctatatcaaggcgggcgagctttttaacaaatacgttggtgagagt
gagcgagcggttcggcagctgttttctcgtgccagagattgctcgccttgcctcatattt
tttgacgaaatagatgcattggcaccaggccgtggaagcgaagcaaatgcggcgactgac
agggtagtgaatcagcttttagtcgagatggatggtctggagcagcgaaagtgtgtattc
gtgattggagcgacaaataggccaaacatgatcgatactgcgttgctcaggccgggtcgt
ctcggcaaacgcatctacatccctctcccagatgctcaaggacgagaatcaattctcaga
gctttgttgcgatgcttgcctctagcggcggacgtagacatggccgctatcgcgcagcac
gagctttgcgaaggcttcacaggagccgatctccatggccttgtccaggaggcatgcggc
gtcgctctgcgcgagaggataccactgtggcgtgcgagcaacggacaagctccgcaaagc
ggggttacactcacccaaaagcacttcgcggaggctctcaatcgagtggagccttccgta
tcggccggggtacgcatcaaagtcacgattttttccctcctccgcgtcataacacacctg
tga
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