Selaginella moellendorffii: SELMODRAFT_105080
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Entry
SELMODRAFT_105080 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_105080
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELMODRAFT_105080
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
SELMODRAFT_105080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
RQC
CtIP_N
Motif
Other DBs
NCBI-GeneID:
9648651
NCBI-ProteinID:
XP_002976458
JGI:
105080
UniProt:
D8RZC1
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
ENVLQERDLFAFTAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQIIEQDWSGNFE
WDNEASNLLLNVFGISTYRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALLRPGIA
LVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILYVTPEKI
AKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALT
ATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPS
NESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVA
FGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLFFRPADVPRQSCMVFSE
NTGLQNLYAMARYCQSKQRCRRAAFFQYFAEQVQECNGMCDTCAFENDVVEKDVTEYGKS
LVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGNHISGVYGHILQSQTGDKEMSKDDAEQI
ILQLILDGTLAKDFQHTAYATNAYVKAGSAARLILQGELPSCKRKVILEQCEKRGPVKTT
LDDCAMQSGMARMLDTLRQTLAAADGGIFPYAVLSSQHIKRLSSHVPTSITELDEIIGKT
KSSKYGEQIMTTLNEYTTKNTDGPDTKEASSSKRVATTGGQARQTKRSRNA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gaaaatgtcctccaggagcgtgatctatttgctttcacagctcagattgccgttctctgc
gatcgccaagcgcgtcttcttgaggagcaagcggagcttcgccagctgatcgactgctgc
agagcttccgaggaggatgatatccaaatcattgagcaggactggtctggaaactttgag
tgggataacgaggcatccaacttgctactcaatgtctttggcatttccacttaccggcgg
aaccagagagagattgtaaacgcgctgatgagtaacaagaatgtggtcgttgttatggcg
gcaggaggagggaagagtctgtgctatcagcttccagctcttctccggccaggaattgct
cttgttgttagtccccttttgtcccttattcaagaccaggtcatgggactggctgctttg
ggagtctctgccgccatgctgacttcgacaacctccaaggaggaagaaaaggagatttat
agagttcttgagaagggcgacggaaacttgcggattctatatgttactccggagaagatt
gcgaaaagtaaacgtttcatgtcgaagcttgaaaagtgtaaccgggccggacgtctctct
cttgtagctatcgatgaagcacattgctgcagccaatggggacacgactttcggccggat
tataaaaacttggggattctgaagaagcagtttcctaaagtacctatgattgcgttaact
gccactgcaactgggcgtgttcaaagagatttgcaggagatgctgcaaatcctgccatgc
gagagatttacaagctccgtcaatcgtccgaaccttttctacgaggtccgtgataaaaag
caggttgcggccgacgttattgaagacatcgcattgtttataaaggagacttatccatcc
aatgagtccggaatcgtttactgtttctcacgtaaagagtgtgagcaggtcgctgacgct
ttgcggaagcgtcaaatatctgctgctcattatcatgcggacatggactctggtcttcga
acaaatgttcatcgaaggtggagtagcaaccagctccaagtgattgttggcacggtggcc
tttggcatgggaatcaacaaaccagatgtgcgttttgttatacaccataccctgagtaaa
tccttggagacgtattatcaggagagcggacgtgctggccgtgatggacttccatctcgc
tgcgtattatttttcaggccagctgatgtccctcgacaaagctgcatggtgttctccgaa
aatacgggcttgcagaatctttacgcaatggctcgctattgtcagtcgaaacaaaggtgt
cggcgagcggcgttttttcaatattttgccgaacaagtacaagagtgcaacggaatgtgc
gatacttgcgcatttgagaacgacgttgttgagaaggatgttacggagtacggcaagtcc
ctcgtgcagtctgtaatggacgttgcggagagtgacaagaaaactacgttgctgcagctt
gtggatctgtggagaagtcagctacgacaggcaggtaaccatataagcggcgtttacggg
catatattgcaatcccaaacaggtgacaaggagatgagtaaggacgatgcagagcagatc
attcttcaactaattctagatggcacattggcaaaggactttcaacatactgcttatgct
acaaatgcctacgtaaaggcaggatcggcagcaagacttatattgcaaggtgaacttcct
tcatgcaaaagaaaggtcatccttgaacaatgtgagaagagaggacctgtgaagacaact
ctggacgattgcgccatgcagtctggcatggctcgtatgcttgatacacttcgccagaca
ctggctgctgccgacggtggcatttttccttatgctgtgctttcttctcagcacatcaag
agactgtcctcacacgtccccacatcaatcacggagctggacgaaatcattggcaaaacc
aagtcatccaagtatggagagcagataatgaccaccttaaacgagtataccacaaagaat
acagatggtccggacacgaaggaggcgtcttccagcaagagggtggccacaactggcggt
caggcgaggcaaactaaaagaagcaggaatgcatga
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