Selaginella moellendorffii: SELMODRAFT_105931
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Entry
SELMODRAFT_105931 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00531
Glycosaminoglycan degradation
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
SELMODRAFT_105931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smo00536
]
SELMODRAFT_105931
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
SELMODRAFT_105931
Glycosaminoglycan binding proteins [BR:
smo00536
]
Heparan sulfate / Heparin
Enzymes
SELMODRAFT_105931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
9638538
NCBI-ProteinID:
XP_002976895
JGI:
105931
UniProt:
D8S0W9
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MQRVVLQINTTSPVARISENFICATLDWWPPEKCDYGYCSWGRASLLNLDLWNPRLVNAV
KGLSPLLLRLGGSLQDQIIYEVGVRPGPCLPLQKQPSAMFGFTGGCLNMSRWTELNSFFE
KTGALVAFGLNALYGRTKFEDNGFKGSWKSSNARDLMKFSLDHGFPIVAWELGNELSGSG
VGTSISAKQYAADIKELRSVVDQVYARSTIKPQVVAPDGFWDYGWFHDFLQSTGPNVVNA
CSHHIYNLGPGVDTHLIEKIVSPSYLSQEAGTFEGVEKLMKAYGTEAWVGEAGGAYNSGH
HNVTDRYVFSFWYLDELGMSAYYNTAVYCRQSLIGGNYGLVDRTSYDLNPDYFSALLWKK
LMGRNVFSATAENTPYLRTYAHCLKSNQQGGLTVLIINLSNSTQYSVDLSLTHSEKDCSC
NKPRTKKLAGAGVNAERMEYHLTAPNGDLQSPVMLLNGKPLVAGADGSIPELTPVTRTSS
SPVLVDPYSIVFAVIPEAGVQSCTQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagttgttctccagatcaacaccacctctccagtggctcgaatcagtgagaac
ttcatctgtgcgacgctcgactggtggccacccgagaagtgcgactatggatactgcagc
tgggggcgagcctcgcttctcaatctggatctctggaatccaaggctggttaacgctgtc
aaaggattgtctccgttactgctgagactgggaggatcactccaagaccagattatttac
gaggttggtgtcaggccggggccatgcttaccgcttcaaaagcagccttcagccatgttt
ggattcacaggcggatgtctcaacatgtcccgatggacggagctaaattcctttttcgaa
aagacaggggctctggtggctttcggtctgaatgccctctacggaaggaccaagttcgaa
gacaacggtttcaaaggatcatggaagtcctccaatgccagggacttgatgaaattctct
ctggaccatggctttccaatcgtagcttgggaactcggaaacgagctaagtggaagcggg
gtcggaaccagcattagtgccaagcagtacgcggccgacatcaaagagcttcgttcagtc
gtcgatcaagtgtatgcgagatccaccatcaagcctcaagtggtagcaccggatggtttc
tgggattacggctggttccatgactttctccaaagcacagggcccaacgtcgtcaacgcc
tgctcccatcacatctacaacctcggacctggagttgacacacacctcatcgagaagata
gtcagcccgagttaccttagtcaagaagcagggacctttgagggagtggagaagctgatg
aaagcgtatggaaccgaggcctgggttggagaagccggaggagcatacaacagtggtcac
cacaacgttaccgacagatatgtcttcagcttctggtacctcgacgagctggggatgtct
gcatactacaataccgcagtgtactgcaggcagtccctgataggaggcaactacggcctt
gttgatcgcacatcatacgatttgaatcccgactacttctcggcactgctttggaagaag
ctaatgggccggaacgttttctctgcaactgcagaaaacacaccgtacctacgaacgtac
gcacactgcctaaaaagcaaccagcagggaggattgacagtgttgataataaatctcagc
aactcaacgcagtactcggtcgacttaagcctcactcacagtgagaaggactgctcctgt
aataaaccaagaacgaagaagttagccggagctggagtaaacgctgagaggatggaatac
cacttgacagctccaaacggagacttgcaaagcccagtaatgctgctgaacgggaagcca
ctcgtagcaggagccgatggcagcataccggagttaactccggtgacaagaacaagttcc
tcgccggttctggtcgatccatactcgattgtcttcgcggtaatcccagaagcaggtgtc
caatcgtgcacacaatag
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