KEGG   Selaginella moellendorffii: SELMODRAFT_106210
Entry
SELMODRAFT_106210 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
smo  Selaginella moellendorffii
Pathway
smo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SELMODRAFT_106210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_106210
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_106210
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SELMODRAFT_106210
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     SELMODRAFT_106210
    COMPASS/SET1 complex (yeast)
     SELMODRAFT_106210
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th WD40_RFWD3 Cytochrom_D1 Beta-prop_SCAP Beta-prop_WDR19_1st RMC1_N
Other DBs
NCBI-GeneID: 9638691
NCBI-ProteinID: XP_002977256
JGI: 106210
UniProt: D8S1J6
LinkDB
Position
Unknown
AA seq 308 aa
MESLSSTYRSNLVPQGGKISSLDFHRTEDLVVTAAEDASIRLYDTATATPMKTLYSARYG
VDHICFTHHTNAVIFSSSNGSDESFRYLSLYDNRFLRYFRGHTQRVVSLCMSPKNDSFMS
GSLDHTVRLWDLRSNVCQGLLRVRGRLSVAYDQQGLVFAVAMEGGAIKLFDGRSFDKGPF
DTFLVGGDTAEVAGMKFSNDGKMMLLSTTNSRVYLLDAYSGKKMHGFTLKPSRDEETLEA
SFSPDGRYVISGSGDGSLRIWSSLSGAEVACWTNNAGIPAVVKWAPRRLMFATASYVLAF
WIPDVSKL
NT seq 927 nt   +upstreamnt  +downstreamnt
atggaaagtctttcatcaacttacaggagcaatcttgtcccacagggggggaagatcagc
tccttggattttcatcgcacggaggatctcgtggtgactgctgcggaggacgcgtccatt
cggctctacgatactgccactgcgacgcccatgaagactctctacagtgcaagatatggc
gtggatcacatatgtttcacgcatcacaccaatgctgtgattttttcctccagcaatgga
agtgatgagtcctttcggtatctatcgttgtatgataatagatttctacgatatttcaga
ggacacacgcaaagggttgtatcactatgtatgtctccaaagaacgattctttcatgtct
gggtcattggatcacactgtccggttgtgggatcttcgcagcaatgtttgccaaggtctt
cttagagtccggggaagactgtctgtggcgtatgatcaacaaggcctggtatttgctgtt
gccatggaaggcggagcaatcaagctgtttgacggaaggtctttcgacaagggacctttt
gacacttttctcgtgggtggtgataccgcggaagtcgctggcatgaagtttagcaacgat
ggtaaaatgatgcttctctccacaacaaacagccgggtgtatttgcttgatgcctactct
ggaaagaagatgcatggattcacgctcaagcccagtcgagacgaagaaacgttggaagca
tcgttcagtccagacggtcgctatgttatctcaggctccggggatggaagtttgagaata
tggagctccttaagcggtgcagaggtagcgtgctggacgaacaacgctggaattcctgcc
gtggtgaaatgggctccgcgaaggctcatgtttgcgactgcctcatatgttttagcgttt
tggatacccgacgtgtccaaattgtaa

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