Selaginella moellendorffii: SELMODRAFT_106218
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Entry
SELMODRAFT_106218 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00500
Starch and sucrose metabolism
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SELMODRAFT_106218
Enzymes [BR:
smo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SELMODRAFT_106218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
GHL10
TMEM190
Motif
Other DBs
NCBI-GeneID:
9639043
NCBI-ProteinID:
XP_002977130
JGI:
106218
UniProt:
D8S1P2
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
VSNGQATPLGASKLREGVNFALFSEHGTSVTLCVRLGTEGPVKEIVLDPQKNRTGNVWHI
CLENIPLSGVLYGYHVDGPRDKNSRFDKNTLLLDPYAKYVEGRRIFADKTQKLAPHWGTF
DFTLSEFDWEGDEARTRVPEKDLVIYEMSVRGFTKDQSSGVAEEVRGSYLGFIDKIPHLV
ELGVTAVELLPIFEYDELEFQRRPNPRDHMVNAWGYSTINFFSPMSRFASNGGGPIAASL
ELKQMVKALHKAGIEVLLDVVYNHTNEGGNADPYVTCFRGVDNAVYYMMDANGYMNYSGC
GNTLNCNHPVVTEFILDSLKHWVTEYHIDGFRFDLASVLCRGTNGAPLANPPLIRAICKD
EVLSKCKLIAEPWDCGGLYLVGAFPNWDRWAEWNGKYRDDLRRFVKGDCGMKRTLATRLS
GSADLYNKNQRKPYHGINFIVAHDGFTLYDLVAYNMKHNDANGERGQDGSNDNFSWNCGV
EGETGDQAVNGLRARQMKNLHVALMFSQGTPMMIMGDEYAHTKYGNNNTYGHDTSLNDFL
WTQLQKKKDHFAFFSKVIKFRLKHPLLARSEFLSNSDVTWHETQWDNPDSRFLAFTLHEG
KLGGGDLYMAFNAHTYAVNAALPRPPGGKRWLRLIDTHFAHPEDFCEEGVGGLQERYSVV
PFSCIVLIAKS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaacgggcaggctactcccctcggtgcatctaagctgagagagggcgtcaatttt
gcgttgttttcagagcatggaacttctgtgacgctatgcgttcgcctgggaacagaaggt
cctgttaaagagattgtgctcgatccacaaaagaacagaactggaaacgtctggcacata
tgtcttgagaacatcccgctaagcggtgtcttgtatggatatcatgttgatggacctcgc
gacaagaatagtcgatttgacaaaaacacgctgctgcttgatccgtatgcgaagtatgtg
gaaggacgtagaatttttgcagataagacccagaagctggctccgcactggggaactttc
gattttacactatctgaatttgactgggagggagatgaagcacgcaccagggtcccggag
aaagacctggttatctacgagatgagtgtgcgtggttttacaaaggaccaatcttctggt
gttgctgaagaagttcggggaagttaccttggctttattgacaagattccgcatttagtc
gagcttggcgtgacagcagttgagcttcttccaatatttgagtacgacgagcttgagttt
caaaggagaccaaacccacgggaccacatggtaaacgcttggggctactcaaccataaac
ttcttttctccgatgagtcggtttgccagcaacggaggtggacctatagctgcatctctg
gagctaaagcaaatggtgaaagcgcttcataaagcggggattgaggttctcttggatgtg
gtgtacaatcacacaaacgaaggaggcaatgcagatccttatgtcacatgcttccgaggt
gtagacaatgcggtgtattacatgatggatgcaaacggctacatgaactattctggatgc
ggaaacactctgaattgcaaccatccggtcgttactgagtttattttggacagcctcaag
cactgggtcacggaatatcatattgatggatttagattcgaccttgccagtgttctttgc
cggggtaccaatggcgctccattggcgaatcctcctcttattcgggcaatatgtaaggat
gaagtgctgtccaagtgcaagcttattgccgaaccttgggattgtggaggcctgtattta
gtaggcgcgtttcctaactgggacaggtgggcagagtggaatggtaaatatcgggacgat
ctgcggcggttcgtcaagggcgattgtggaatgaagaggacactggccacacggctatct
ggatccgcagatctgtacaataaaaaccaacgaaagccttaccatggtatcaactttatt
gttgcacatgatggcttcactctatatgaccttgtggcatacaacatgaagcacaacgac
gcaaatggggagcgtggacaagatggcagcaatgataattttagctggaattgtggagta
gaaggtgaaacgggtgatcaggctgtgaacggtcttcgagcacgccagatgaaaaaccta
cacgtagcgttaatgttctctcagggaacgccaatgatgatcatgggtgatgaatacgcc
catacaaaatatggtaacaacaacacgtatggtcatgacaccagtctaaacgatttttta
tggacccagctccaaaagaagaaggatcattttgcttttttttccaaggttataaagttt
cgcttgaagcatcctctgcttgctcgttcagagttcctctccaactccgatgttacatgg
catgaaacccagtgggacaatccagattctcggtttctagctttcacgctacacgagggc
aagcttggaggtggagatctctacatggcgttcaacgcacacacttacgccgtgaatgcc
gcactcccacgtccgccgggtggaaaacgctggcttaggctgattgacacccatttcgct
caccccgaagatttttgcgaggaaggggtcggaggcctccaggaacgatacagtgttgtg
cctttcagctgcatcgtactcattgcaaagtcataa
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