| Entry |
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| Name |
(RefSeq) hypothetical protein
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| KO |
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| Organism |
smo Selaginella moellendorffii
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:smo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_107227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:smo03019]
SELMODRAFT_107227
03041 Spliceosome [BR:smo03041]
SELMODRAFT_107227
03009 Ribosome biogenesis [BR:smo03009]
SELMODRAFT_107227
03016 Transfer RNA biogenesis [BR:smo03016]
SELMODRAFT_107227
Enzymes [BR:smo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SELMODRAFT_107227
Messenger RNA biogenesis [BR:smo03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SELMODRAFT_107227
Spliceosome [BR:smo03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SELMODRAFT_107227
Complex C
U4/U6.U5 tri-SnRNP related factors
SELMODRAFT_107227
Ribosome biogenesis [BR:smo03009]
Eukaryotic type
Pre-60S particles
Helicases
SELMODRAFT_107227
Transfer RNA biogenesis [BR:smo03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SELMODRAFT_107227
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
987 aa
MAAASTKRGAEDDLASPSLKQAKISETLAPAAIERGCIHEIAYPDGFQASGEKRDAPAKP
AKEYPFTLDAFQREAIAALEAGESVMVSAHTSAGKTVVAEYAIAMALRDQQRVLYTSPIK
ALSNQKFRELAEEFSDVGLMTGDVTISPNASCLVMTTEILRSMQYRGSEVMREVAWIIFD
EVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDFR
PTPLQHYIFPAGGDGLYLVVDEQGTFREDSFSKAVNAVAIADPKKDGKWQKRKEEGKDEP
SDIWKIVKMIIARQYDPVIVFSFSKRDCEHLAMQMSKMDLNSEDEKKLVEGIFRNAMDSL
SEDDKKLPQVSLALPYLKRGIGVHHSGLLPILKEVIEILFQEGLVKCLFATETFSIGLNM
PAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGLDNFGVCIFMLDEKLEPAVAKQI
VKGTADPLNSAFHLSYNMILNQMRCEESNPEDLLRQSFHQFQSDRSLPILEQRVKNLEEE
RASVLIEEEEKLAEYYSSVNQLRKIKNQIREIILAPRSCLPFLQPGRLVRIFRSADAVEQ
QNSVLMEQDPAVWGVIINFEKAQSKDSDEGKPNGAHLKYVVDVLVNCVTEKEGDRPKVAR
PVSLDEDGQPLVTAFPLSQVESLSAVRIRIPRDLRPAEAREQTLRTVLEVLKRFPDGLQL
LDPEDDMKVESSDYKKLVRRVEALETLIAKHPVAKSPTLNERLRLLQKKEDLAETIRVAR
KEVRAASALIFKDELKARRRVLRRLSYATRDDVVQLKGLVACEISSADELIVTELIFNGV
FKDVTAEQAAALLSCFVWQEKTKMAKPLSQELAGLFSQLQDTARQVGKLQVECKVVPVDV
EEYVNSFRPDIMEGVHAWCTGKSFLEVLKVAEVFEGSLIRALRRLEELVQQLVTASKAIG
EADMEAKFQDASTKMKRDIVFAASLYL |
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| NT seq |
2964 nt +upstreamnt +downstreamnt
atggcggctgcgtccaccaagcgcggcgccgaggatgatctcgcgtcgccatcgctcaag
caggccaagatttccgagacgctagcgccggcggcgatcgagcggggttgcattcacgaa
atcgcgtatccggatggattccaggcttcaggtgagaagcgtgacgctcccgcgaagcct
gccaaggagtatcccttcacgctcgacgctttccagcgtgaggcgattgcggcattggaa
gctggagaatcagtcatggtctcggcacacacgtcggcaggcaagactgtggtcgcggag
tatgcgattgccatggctctaagagatcagcagcgtgtgctttacacatctcctatcaag
gcgctgagcaaccaaaagtttcgagagctcgcggaggagttttcggacgtggggctgatg
actggtgacgttacaatctcccccaatgcgtcttgcttggtcatgactaccgagattttg
cggagcatgcagtatcgaggatcagaagtcatgagagaagttgcgtggataatttttgac
gaagttcactacatgagagaccgggaacgaggagtggtgtgggaagaaagcattgtcatg
gctcctaagaacgcccgttttgtttttctatcagcgacggtgccaaatgctaaagaattc
gctgactgggttgcaaaggttcatcaacaaccttgtcacatcgtgtatactgacttcaga
ccaacgcctctacaacactatatttttcccgccggtggggatggtttgtatcttgtcgtc
gatgagcaaggtacgtttcgagaggacagtttctcgaaagcagtgaacgcagttgcaatt
gccgatccaaagaaggacggaaaatggcaaaagcgaaaagaagaaggaaaggacgaacca
agtgacatctggaagattgtgaaaatgattattgcacggcaatatgatccagtgatagtg
ttcagttttagcaagagggattgcgagcatcttgcaatgcagatgtcaaaaatggacctt
aactcagaagatgaaaagaaacttgttgaaggcatatttcgaaatgccatggactcttta
tctgaagacgataaaaagcttcctcaggtctctctggccctgccttatttgaagcgcgga
atcggagtgcatcactcgggcctgttgcccattcttaaagaagttattgagatattattt
caagaagggctcgtaaagtgcctgtttgctacagagacattcagtattggactgaatatg
cctgccaagacagtcgtgttcacgaacgttcgcaagtttgatggtgacaagtttcgctgg
ataaccagcggcgaatatattcaaatgagtggacgcgcagggcgtagagggcttgacaat
tttggcgtatgtatttttatgctagatgaaaagctagaaccagctgttgcaaagcagata
gtgaagggcactgccgatccattgaatagtgcttttcatctcagctataatatgatatta
aatcagatgcgctgtgaagagagtaacccagaagacttacttcgccagtcctttcaccaa
tttcagtctgatcgaagcttaccaatccttgagcaacgcgtgaagaatctggaagaagaa
agagcttctgttcttattgaagaagaggagaagctagcagaatactactcatcggtcaat
cagttgaggaaaataaagaatcagatacgggagattatactcgctcctcgatcttgtctt
ccgtttcttcaacctgggcgtctagtgcggatattcagatctgctgatgcagtggagcaa
cagaatagcgtactaatggagcaagatcctgctgtatggggcgttattatcaactttgag
aaggctcagtcaaaggactcagatgaaggtaagccgaatggcgcacacttgaaatacgta
gtggacgtgctggtgaactgcgtaactgagaaagaaggggacagaccgaaggtggcacgt
cctgtatctctggatgaggatgggcaacctttagttacagcatttcctttgtctcaagtg
gagagccttagtgccgttcggattcgtattccaagagatttgcgtccagctgaagcaaga
gagcagaccttgaggaccgtgctggaagtactgaaaaggtttcccgacggattgcagctt
ttagatcccgaggatgatatgaaggtggaaagcagcgattacaagaagttggtgcgacga
gtggaagcactggaaactctgatagcaaaacacccagttgcaaaatctccaactctaaat
gaacgattgaggctgctccagaagaaggaagatctagccgagaccattcgtgtagcgcgg
aaggaagtgcgtgctgcgtccgctctaatattcaaggacgaactaaaagcgcgtcgaaga
gttttacgtcgtttaagttatgccaccagggacgacgttgtgcaactcaaggggctcgtg
gcctgcgagataagcagcgcagacgagctcattgtcacggagctgatattcaatggtgtt
ttcaaggacgtcacagcagagcaggctgccgcgctactgtcatgcttcgtgtggcaagag
aagacgaaaatggcgaagccgctgtctcaagaacttgctggactgttttcgcagctccag
gacacagccaggcaagttggaaaactccaagtggaatgcaaggtagttccagtcgatgtg
gaggaatacgtgaattcgtttcggccggatataatggagggagtccatgcctggtgcacc
ggaaagagctttctggaggtgttgaaagtggcggaggtgtttgaagggagcttgatccgg
gcgcttagaaggctggaggagcttgtccagcaactggtcacagcctcgaaagccattgga
gaggcagacatggaggccaagttccaggacgcaagcaccaagatgaaaagggacattgtg
tttgcggcgtctctatacctatga |
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