Selaginella moellendorffii: SELMODRAFT_107678
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Entry
SELMODRAFT_107678 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_107678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_107678
Spliceosome [BR:
smo03041
]
Common components
Common spliceosomal components
SR proteins
SELMODRAFT_107678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
9656459
NCBI-ProteinID:
XP_002977696
JGI:
107678
UniProt:
D8S330
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MSRSSRTIYVGNLPGDVREREIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDA
IRGRDGYNFDGYRLRVEIAHGGRGPPSSDRYSSYGGRGGSVSRRSEYRVIITGLPSSASW
QDLKDHMRRAGDVCFAQVFREGNGTTGIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRV
KEDKSQGLKRSTSRSLSRSRSRSHSHSYTRSRSRSGSRSRSRSRGRSRTPRSRSKSPSKS
VSKSPVARSRSPQTSVSWGELSPVKELSPSPSPRRSRSPSPAVILLLPVACTDKLAVV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtccagccgaactatttatgtcgggaacctcccgggagacgtgagagagcgg
gaaattgacgacttgtttcacaagtatgggcccattgtagacattgacttgaaactccca
ccgaggcctccaggctactgcttcatcgagtttgaagacgttcgagatgccgaggatgct
atacgcggacgtgacggctacaacttcgatggataccgtttacgggttgaaatcgctcac
ggtggccgaggccctccgtcctcggatcgatacagcagctatggcggccggggcggaagt
gtgtccaggcgttcggagtatagagttataatcactggattgccctcgtcggcatcgtgg
caggatttgaaggaccatatgcgccgagctggcgacgtttgctttgcacaagtgtttcga
gagggaaatggaactactggcattgtggatttcaccaattatgacgatatgaaatacgcg
ataaaaaaacttgatgattcggagtttcggaatccattttctcgctcgtacattcgtgtc
aaagaagacaagtctcagggcttgaaacgaagcacttcacgcagcttgagtcgaagtcgg
agcaggagtcatagccacagctatacccgaagcaggagccgcagcggaagtcgcagccga
agtcgcagccgcggacggtcaaggactccgagaagcaggtccaagtccccctcgaagtca
gtgtccaagtctcctgtagcacggtcacgctcgcctcagacgtcggtaagctggggtgaa
ttgtctcctgtgaaggagttgagcccaagcccaagcccgcgtcgctcacgctcaccttct
cctgcggtaattctgcttttacctgttgcttgtactgacaagttggcggtggtgtag
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integrated database retrieval system
