KEGG   Selaginella moellendorffii: SELMODRAFT_108336
Entry
SELMODRAFT_108336 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_108336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_108336
Enzymes [BR:smo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     SELMODRAFT_108336
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SELMODRAFT_108336
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SELMODRAFT_108336
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-GeneID: 9653288
NCBI-ProteinID: XP_002978073
JGI: 108336
UniProt: D8S4E2
LinkDB
Position
Unknown
AA seq 334 aa
FRVVSYNILAQVVYVKSSLFPHSPSLCLKWKTRSEQVLSRLLSLDADLLCLQELDEFESF
YKPLLESKGYSSIYVQRSGKKRDGCGIIYKAKCFSTITTSRLMKPQPEERRNPSVYIHTR
RCIVSDFSVPEEENNRDVSDPRVRFRRNCVGIFSAFRFNHAPSNIVVIANTHLYWDPALQ
DVKLAQAKYLLAKLLQFEKEISQEFNSNPVVLVAGDFNSTPGDRVYNYITSGRRNSGPDV
ELSSFKVPDLESLKVPAIPLDSLYAAAQGEPAFTNCTPDFTGTLDYIFFSPSASMRPKTI
LEVPRPDAPDVKGGLPNHFHPSDHLPIGADFSLS
NT seq 1005 nt   +upstreamnt  +downstreamnt
tttcgagtggtttcatacaacattcttgcacaagtagtctatgtgaagagttcgctgttc
cctcattcgccatccttgtgtttgaagtggaagacgcgctcagagcaagttctatcgcgt
cttttgtctctggacgctgatctcctttgtctccaggagctagacgaatttgagagcttc
tacaagcctctccttgaaagcaaaggctactctagcatctacgtacagagaagtggcaag
aaacgcgatggctgcggcatcatctacaaggccaaatgtttctcgactataacgacatcg
cgcctgatgaaaccacagccggaagagcgtcggaatccgtcggtatatatccacacacgc
cgatgtattgtctctgatttctcagttccagaggaagagaacaacagagatgtgagcgat
ccacgcgtgcgctttcgaaggaactgtgttggaattttttcggcctttcgcttcaatcac
gcgcctagtaacattgttgtgattgcaaacacgcacctatactgggatccagcgctgcaa
gacgtgaaactcgcacaagccaagtacctgcttgcaaagctcttgcagttcgagaaggag
atatctcaagaattcaactccaatcctgtcgttctagtcgcaggggatttcaactccact
ccgggtgatcgggtgtacaactatatcacctccgggcgtcgcaactccggccccgacgtc
gagctctctagtttcaaggtgcccgacttggagagcttgaaagtcccagcgatcccactc
gacagcctgtacgccgctgcacaaggcgagccagcgttcacgaactgcaccccggatttc
acaggaactctggactacatcttcttcagtccctcggcgtccatgagaccaaagacgatc
ttagaggtgcctcggccggatgctccagacgtcaagggagggctcccaaaccatttccac
cccagcgatcatcttcccataggagcggacttcagcctctcgtga

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