KEGG   Selaginella moellendorffii: SELMODRAFT_108429
Entry
SELMODRAFT_108429 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
smo  Selaginella moellendorffii
Pathway
smo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SELMODRAFT_108429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_108429
   03110 Chaperones and folding catalysts [BR:smo03110]
    SELMODRAFT_108429
   03029 Mitochondrial biogenesis [BR:smo03029]
    SELMODRAFT_108429
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_108429
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SELMODRAFT_108429
Messenger RNA biogenesis [BR:smo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SELMODRAFT_108429
Chaperones and folding catalysts [BR:smo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SELMODRAFT_108429
Mitochondrial biogenesis [BR:smo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SELMODRAFT_108429
Exosome [BR:smo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SELMODRAFT_108429
  Exosomal proteins of other body fluids (saliva and urine)
   SELMODRAFT_108429
  Exosomal proteins of breast cancer cells
   SELMODRAFT_108429
  Exosomal proteins of colorectal cancer cells
   SELMODRAFT_108429
  Exosomal proteins of bladder cancer cells
   SELMODRAFT_108429
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 9658169
NCBI-ProteinID: XP_002978237
JGI: 108429
UniProt: D8S490
LinkDB
Position
Unknown
AA seq 557 aa
ALQEVSKAQWVRRYSAKEIKFGVEARALMLQGVEQLADAVKVTMGPKGRNVVIDQGFGSP
KVTKDGVTVAKSIDFKDKLKNVGASLVKQVANATNDVAGDGTTCATVLARAIFAEGCKSV
AAGMNAMDLRRGISSAVESVVENLKSKAKMISTSEEIAQVGTISANGDREIGDLIARAME
KVGKDGVITVSDGKTLHNELEVVEGMKLDRGYISPYFINNAKTQKCELENPVILIHDKKI
STVSAIMPVLELVVKEQRPLLIVAEDVDGEALATLIVNKLRGGFKCCAIKAPGFGDNRKS
CLQDLAVLTGGQLVSEDVGIKLEKVDRSMLGSAKKVTISKDDSIVLDGLGDKKEIEERCE
QIREAVKSSTSDYDKEKLQERLAKLSGGVAVLKIGGGSEAEVSEKKDRVTDALNATKAAV
EEGIVPGGGVALLYASRDLDKLETPNFDQKVGVQIIQSALKMPTYTIAANAGVEGAVVVG
KLWEQNDYNLGYDAAKGEYVDMVKAGIIDPVKVLRTALGDAASVSSLLTTTEAVVYDLPK
EEKAAAGGGMGGHDLDY
NT seq 1674 nt   +upstreamnt  +downstreamnt
gcattgcaggaggtgagcaaggcgcaatgggtgaggagatactccgccaaggaaatcaag
tttggagtggaggctagggctcttatgctccagggcgtggagcagctcgctgatgccgtc
aaagtaaccatgggtcccaaggggcgaaacgttgtgatcgatcaaggctttggttctccc
aaggttaccaaggatggtgtgactgttgccaagagcatcgacttcaaggacaagctgaag
aacgttggtgctagcctcgtgaaacaagtcgccaacgctaccaacgatgtggcaggagat
ggaactacttgcgcaactgtgcttgctcgcgcaatttttgcagagggttgtaagtctgtg
gcggctggaatgaatgccatggacttgcgccgtggtatcagctcagctgtggaatccgtg
gtggaaaatctgaagagcaaggcgaagatgatcagcacatcagaggagattgctcaggtc
ggtaccatttcggcaaatggtgacagggaaatcggtgacctgattgctagagccatggag
aaggtcggcaaagatggtgtcatcacagtatcggatggcaagaccttgcacaacgagcta
gaggttgtggagggtatgaaattggacaggggatacatttccccctatttcattaacaac
gctaagacacagaaatgcgaacttgaaaatccagttattctgattcacgacaagaagatc
tctactgtcagtgccatcatgcctgttttggagcttgtcgtgaaggaacaaagaccactt
ctcattgtggcagaggacgttgacggcgaggctctggcaactctgattgtcaacaaactc
cgaggtggttttaagtgctgcgccatcaaagcccctggatttggagacaacagaaaatcg
tgtctgcaggatcttgccgtgctcacgggcggtcagcttgtcagcgaagatgtaggtatc
aagcttgagaaggtcgatcgttccatgcttggttcagcaaagaaggttacaatctcgaaa
gacgacagcattgtcctggatggccttggcgataagaaggaaatcgaggaaagatgcgaa
cagatcagagaagctgtgaagtctagcacatcagactatgacaaggaaaagctccaagaa
aggctggccaagctctctggaggtgtagccgtcttgaagattggaggaggtagtgaagcg
gaagtcagtgaaaagaaggatcgggtgacggatgcgctgaatgctacaaaggctgcagtg
gaggagggaatcgtgccaggtggtggagtcgctcttctctacgcgtctcgcgatcttgac
aagctggagacgcccaacttcgaccagaaagtgggagtccaaatcatccagagcgcgcta
aagatgcccacgtatacaattgctgccaatgccggagtggagggagcggtcgttgtaggc
aagctatgggaacagaatgactacaacttgggttacgacgcggcgaaaggtgaatacgta
gacatggtaaaggccgggattattgaccccgtgaaggtgttgagaactgctctgggtgac
gccgccagtgtttcttcgttgctgacaacaacagaggctgtggtgtatgatcttccaaag
gaggagaaggccgcggctggaggaggcatgggtgggcatgatttggattactag

DBGET integrated database retrieval system