KEGG   Selaginella moellendorffii: SELMODRAFT_109026
Entry
SELMODRAFT_109026 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
smo  Selaginella moellendorffii
Pathway
smo03022  Basal transcription factors
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SELMODRAFT_109026
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_109026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_109026
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_109026
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SELMODRAFT_109026
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SELMODRAFT_109026
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SELMODRAFT_109026
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom
Other DBs
NCBI-GeneID: 9653744
NCBI-ProteinID: XP_002978447
JGI: 109026
UniProt: D8S5D4
LinkDB
Position
Unknown
AA seq 733 aa
MGFVVYVVDEHETAGKMDFSKLELKPDHEKRPLWVGPDGHIFLETFSPLYKQAYDFLIAI
AEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEIVNFIKESTLNY
GKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEACESFSFNHGFTVNKSLSNAT
TEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEYDFRNDSVNPDL
SIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLAT
NAVSVDQWAFQFKLWSTIRDDQISRFTSDSKDKFKSNVGVVVTTYNMVAFKGKRSEESEK
VIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIG
PKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYLKKENRKQQALYVMNPNKFRACE
FLIRFHEQQRGDKIIVFSDNLFALREYATKLKRPFIYGPTSHHERTKILYAFKHSPDVNT
VFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKPKDRVKGGTEEFNAF
FYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVLTSLPPADSGADLSFHRLEDQLDLLSKVL
NAGEDAAGVEQLEHDADDITNLRARRIAGSMSALSGGKGRSYMEFSIGGRGRGQQAKPRD
PNKRHNLFKNRYR
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgggatttgttgtgtatgtagtcgacgagcatgaaaccgcggggaaaatggattttagc
aagctcgagctaaagccagaccacgagaagagaccactctgggttggacctgatggccat
atctttctcgagacgttttctccgctatacaagcaagcatacgactttctcattgccatt
gccgagcctgtgtgtcgtccagaacatatgcacgagtacaatctcacgccacattctttg
tacgcggctgtctccgttggtcttgagactcagacagtcattacggtgctggaacggctg
tcgaaagcaaggctcccgcaggagattgtgaatttcatcaaagagtcgactctcaactat
ggcaaagtaaaactagttctgcagaagaatcgttattttgtagaatcttcttatccggag
attctggagagggttttaaaggacgatgtcatctctcgagccagaattttttcggaggca
tgtgaaagtttttctttcaatcacggttttacggtcaacaagtcgttgtccaatgctacc
acagaacaagacttgcttgccggggatgaagttgctgctggagaagagaaggatgtgatg
tcttttgaaattgatcctgctcaagtagaacatgtgaagcagaggtgcctgccaagtgct
ttaaactatccgatgctcgaggaatacgactttagaaacgattcggtcaatcctgactta
agcattgaattgaaacctcaagctcaacctcgaccttatcaagaaaagagcttgagcaaa
atgtttggaaatggacgtgcgaggtctggaattatcgtattaccttgtggagctggtaaa
tccttagtgggagtctcagccgcctgccgcattcgcaaaagctgcctgtgcttagccacc
aatgcagtgtcggttgaccagtgggcctttcagtttaaactctggtctactatccgtgac
gatcagatttctcgtttcacatcagacagtaaagacaagttcaaatcaaacgtcggtgtc
gttgtgaccacctacaacatggttgctttcaaaggcaaacgatcagaagaatccgaaaaa
gtcattgaattgataaaaagccgcgagtggggcttacttcttatggatgaggtgcatgtt
gtgcctgctcatatgtttcgtaaagttattagtatcaccaagtctcactgcaaacttgga
ctcactgccacacttgtcagagaagacgaacgtattaccgatctgaattttctaattggt
ccaaagctgtacgaggcgaactggctagatcttgtgaaaggcggctacattgccaatgtt
caatgtgctgaagtctggtgcccaatgactaaagaattttacgccgaatacctgaagaag
gagaacagaaagcaacaggcattatacgtaatgaaccccaataaatttcgggcttgtgag
tttctcatccgttttcacgaacaacagcgaggagacaagattattgtcttttctgataat
cttttcgccctgagagagtatgccacaaaattgaaaaggcctttcatttacggtccgacc
agccaccatgaaagaacaaagatattgtacgcttttaaacacagtcccgatgtcaacaca
gttttcttgtcaaaggtcggtgacaattccattgatatacccgaggcaaatgttatcatc
caaatctcttcacatgctggttcccggcgtcaagaagcacaacgactcggtcgaatattg
agagcaaagggaaaacccaaagatcgtgtgaaaggtggcaccgaggaattcaatgccttc
ttctactcgctggtctccacggacactcaggaaatgtattactcttccaagcggcagcag
tttttgatcgatcagggatacagtttcaaggttcttacgagcttgccgccggctgacagc
ggcgcggacctgagctttcacaggctggaagatcaactggacttgctgtccaaggttctc
aatgccggcgaggacgctgctggtgtcgagcagctagaacacgacgctgatgatatcaca
aacttaagagctcgccggatcgctggctcgatgagtgctctctcgggtggcaaagggcga
tcttacatggaatttagtattggcggacgaggacggggccaacaagcgaagccacgcgat
ccaaacaagcggcataatctattcaagaacagatatagatag

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