Selaginella moellendorffii: SELMODRAFT_109142
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Entry
SELMODRAFT_109142 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_109142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_109142
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
SELMODRAFT_109142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9653729
NCBI-ProteinID:
XP_002978425
JGI:
109142
UniProt:
D8S597
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
AVRFMKRNIVDEEGGCILAHAPGTGKTFATVYFYSKYKEIMAGCRLLVLCPKMVQNVWRE
EFRKSQMDTPFFLSSRKSRRLEVLSRWHRQRGVLVMGFTLFMKMSLKKEYRSYMLESPEL
VILDEGHTLRSNGTLLRNAVMNMKTKLRILLSGTLFQNTFEELFNLIFLARPNFIQQLQM
EDRARRWFIKEIGRKFDDGHGHREMQAAQMKLVKMTQGFTDHYTGAILTEVLPGLRDYEI
TTVMTELQHKLVAAVAGTLEMDITRTRISIHPLLRSAEAAGGDFSAVAAEVVDVRASMKT
AFVMKLIELCQCANEKVLVFGEFLAPFHLLLRMLELERGWSRDKEVVFLHGALVTEERHE
LMDRFNAEGSEARVCLASIRACAEGITLVGASRVVLLHPVWNPAQTNQAISRAFRLGQKR
KVFVYRLVTEVERVKNSRTKWKDFCSEAIFETAGSAAPRPQEPASLSAEEIFSEDKLLAQ
IHAEGMVLRVCYRDHFFEQGENQTPGSQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gccgtgcgcttcatgaagagaaacatcgtggacgaggagggaggctgcattctggcacac
gcccctggcaccggcaagacgtttgccacggtttacttctattcaaagtacaaagagatc
atggcgggatgccggctgctcgtgctttgtccgaagatggtccagaacgtatggagagaa
gagtttcggaaatcccagatggacacaccattcttcttgagctctcggaagtcaaggcgg
ctagaggtcctctcacggtggcacaggcaacggggcgtgctggtgatgggcttcaccttg
tttatgaagatgagcttgaagaaggagtaccgcagctacatgctcgagagcccggagctg
gtgatcctggacgaggggcacacgctgcgatcgaatgggacgctgctcaggaacgcagtg
atgaatatgaagaccaagctgcggatactgctgtccggcaccttgttccagaacacgttc
gaggagctcttcaacctcatctttctcgcgaggcccaacttcatccagcagctccagatg
gaggaccgagctcggaggtggttcatcaaggagataggcaggaagttcgacgacggtcat
ggccacagggagatgcaagccgcgcagatgaagctggtgaagatgacgcagggattcacg
gaccactacacgggtgccatcctcacggaggtcctcccggggctacgggactacgagata
accacggtcatgacggagctccagcacaagctggtggccgcagtggcgggcacgctcgag
atggacatcacccggaccaggatctccatccacccgctgctgaggagcgccgaggccgcc
gggggggacttctccgccgtggcggcggaggtggtggacgtgcgcgccagcatgaagacg
gcgttcgtgatgaagctcatcgagctgtgccagtgcgccaacgagaaggtgctcgtgttt
ggcgagttcctggcgccattccacctgctgctgcgcatgctggagctggagcgcgggtgg
tcgcgggacaaggaggtggtgttcctccacggggcgctggtgaccgaggagcgacacgaa
cttatggacaggttcaacgcggaggggtccgaggcgcgcgtgtgcctggcgtccatccga
gcctgcgccgaggggatcacgctcgtcggggcctcgagagtggtgctgctccatccggtg
tggaacccggcgcagaccaaccaggcgatcagccgggcgttccggcttgggcagaagcgc
aaggtgttcgtctaccggctggtgacggaggtggagagagtgaagaactcgcggacaaag
tggaaggacttttgctccgaggccatcttcgagacggctgggagcgccgcgccgaggccg
caagagccggcgtcgctgagtgcggaggagattttcagcgaggacaagctgctggcgcag
atccacgccgaggggatggtgttgcgggtgtgttacagggatcacttcttcgaacagggg
gagaatcaaactcccggctcacagtga
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