Selaginella moellendorffii: SELMODRAFT_109200
Help
Entry
SELMODRAFT_109200 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_109200
Spliceosome [BR:
smo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SELMODRAFT_109200
Other components
Complex C specific factors
SELMODRAFT_109200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
YagK_YfjJ_C
Motif
Other DBs
NCBI-GeneID:
9658653
NCBI-ProteinID:
XP_002978703
JGI:
109200
UniProt:
D8S612
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MERFSTEGDFVDGEWIDGEFYYRSRRKRRGQTKEEALYGYQSSGSDSDGGGGGRRGRKKR
RGGIIVEDKSSKPVNFVSASVQDVGTENQASAGDDDDGDLELPSALGKKIQEKVRQKTKK
KPGGPASSTSVEYVWQKHTSEFTNKMMSKMGLTGGTGLGKNLQGRVAAIEVKLRPKNMGM
GYNDFQEVTTGRDDPAAATESEEVAHRSRANEQLWMKKNKKKAKTFVSAEELLSRQQGRT
VGKVLDMTGPQVRVVTDMKDLNAERMVVEEDDTPMPELQHNLKLLVDLVASDIQQYDSRL
RHDKQTIAILEKDRDRLQKELELQSRSLEVMHSITSAIEGVQQEAASRRLTLDGLLKTFA
KLKAEFPEEYKLWNLSALVLSHAAPRITSHFQAWQPLLQPSRGVDVLLPWMELLQEQEEE
AIFTEVDSSPYTRLVMETVLPHINRAVINWEAREPEPLLRVLEVWEKLLPASVFQSVLDS
CVMPKLRAQVEAWDPLQDTVPVHHWVHPWLPLLGSRMDPVCDTIRWKLNSVLQAWDPSDV
SAYLMLSPWHSVFDAASWEQLLARNIVPKLKVALEQLEINPAQQRLEPFSWVMAWAPVMP
LRLMIRMLEEKFFPKWHHALFAWLGSNPDFDEVTQWYQGWKSVLPAELLANDRVRWQLNG
ALEMMNQAVEGAPLVMRDAEQWQQQFVEKKFAAVAVAVAEAEAEMSLKEVVESFAQEKDV
QFLPKPGRLHQGLQVYGFGSVSIAVDNHKQAVLAQAGQKWTSVSLEQLLEIHHARKGGKW
NS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcttcagcacggagggcgatttcgtggatggtgagtggatcgacggtgagttc
tactaccggagccgccggaagaggcgggggcagaccaaggaggaggcgctctacggctac
cagtcgtcagggtcggattcggatggaggaggaggaggaagaaggggcaggaagaagcgg
cggggcgggataatcgtcgaggacaagtcgagcaagcccgtgaatttcgtgtcggcgagc
gtccaggacgtgggcactgagaatcaggcatctgccggggacgatgacgatggggatctg
gagctgccgagtgctctgggaaagaagatccaagagaaagtccggcagaagacaaagaag
aaacccggaggcccagcttctagtacctctgttgagtatgtctggcagaagcacaccagc
gaatttaccaacaagatgatgtcgaagatgggattaactggtggtaccggcttgggaaag
aacttgcaaggcagggtggcggcgattgaagtgaagttgaggcccaagaacatggggatg
ggatacaatgactttcaggaggtgacgacgggtcgtgatgatccagcagcagcgacagaa
agcgaagaagtggcccataggtcgagagcaaacgagcagctctggatgaagaagaacaaa
aagaaggcaaaaactttcgtttcagccgaggagctcttgtcacggcagcagggaagaaca
gttggcaaggttttggacatgacggggccacaggtgcgcgttgtcacggacatgaaggac
ctcaacgccgagagaatggttgtcgaggaggacgacacccccatgccggagctccagcac
aacttgaagctcctggtagatctcgttgcttcggacatccagcagtacgactccaggctc
aggcacgacaagcaaaccatcgccatccttgagaaggaccgggaccggctgcagaaggag
ctggagctccagagcaggagcctcgaggtgatgcactcgatcacttccgccatcgaaggt
gtccagcaagaagctgcgtcgcggaggctaactctagacggcctgctcaaaaccttcgcc
aagctcaaggccgagttcccggaggagtacaagctctggaacctttcagctctggtgctg
tctcacgcggcaccgaggatcacgtctcacttccaagcatggcagccgctcctccagccg
tcccgaggtgtcgacgttctccttccgtggatggaactcctccaggagcaggaggaggag
gcgatcttcaccgaggtggactcttctccgtatactcgcctggtgatggaaacggtgctg
ccgcatatcaaccgtgcggtgatcaactgggaagctcgagagccggagccgctcctccgg
gtgctcgaggtgtgggagaagctcctcccagcgtcggtgttccagagcgtgctggacagc
tgcgtgatgcccaagctgcgagctcaggtggaggcgtgggatccattgcaggacacggtc
ccggttcaccactgggtgcatccctggctgccgctcctcggctcgaggatggacccggtg
tgcgataccatccggtggaagctaaacagcgtgctgcaagcctgggatcccagtgacgtt
tcggcctacttgatgctctcgccgtggcactcggtgtttgatgcggcgagctgggagcag
ctcctggcacggaacatcgtcccgaagctaaaggtggcgctcgagcagctggagatcaac
ccggcacagcagcggctggagcctttctcgtgggtgatggcctgggctccggtgatgccg
ctccgtctcatgatccggatgctggaggagaagttcttcccgaagtggcaccacgcgctg
ttcgcatggctgggatccaacccggactttgacgaggtgacgcagtggtaccaggggtgg
aagtcggtgctgccggcggagctgctggccaacgatcgcgtaaggtggcagctcaacggg
gcgctggagatgatgaaccaggcggtggagggggcgccgctggtgatgcgcgacgcggag
cagtggcagcagcagtttgtggagaagaagttcgcggcggtggcggtggcggtggcggag
gcggaggcagagatgagcttgaaggaggtggtggagagcttcgcgcaggagaaggacgtc
cagttcttgccaaagccggggcggctgcaccaggggctccaggtttatggatttggatcg
gtgagtatcgcggtggacaatcacaagcaggcagtcttggctcaggctgggcagaagtgg
acgtccgtgtcgctggagcagctgctcgagatccaccatgctcgaaagggtggcaagtgg
aactcttga
DBGET
integrated database retrieval system
