Selaginella moellendorffii: SELMODRAFT_109987
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Entry
SELMODRAFT_109987 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_109987
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_109987
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_109987
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SELMODRAFT_109987
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SELMODRAFT_109987
microRNA pathway
RISC loading complex
SELMODRAFT_109987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
RhlB
Motif
Other DBs
NCBI-GeneID:
9659806
NCBI-ProteinID:
XP_002978906
JGI:
109987
UniProt:
D8S6T1
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MARHPQYSQHYQVGGTSGGRSGGQYSQSSSGRGGGGTGGYHGQQQPRQAPAVSAVVEQFS
GLGVEVPVPAQPAPPQPSVVAPPASSKALRFPLRPGRSQTGVKCIVKANHFFAELPDKDL
HHYDVTITPEVISRGVNRAVMEQLVKFHRDSSLGHRLPVYDGRKSLYTAGPLPFHYKDFQ
VSLPEEDDGCGTPRRDRQFKVVIKFAARADLHHLGQFLAGRQADAPQEALQVLDIVLREL
PTHRYSPVGRSFYSPDLGRTQSLGDGLESWRGFYQSIRPTQMGLSLNIDMSFTAFIEPLR
VVDFVGKLLNKDVSRPLSDADRIKIEKALRGVKVEVTHRGTMRRKYRISGLTSQPTQELM
FPVDDRGTMKSVMEYFRDTYHYTIRSPSLPCLQVGNQERPNYLPMEVCKIVEGQRYTKRL
NERQVTALLKVTCQRPRERELDILQTVYHNAYNQDPYAQEFGIRISDRLALVEARILPAP
RLKYHETGREKDCLPQDGTWHMMNKKMVDGGTVNYWACVNFSRTVQDNIARGFCNDLAQM
CLISGMAFAAEPIIPVHAARPDQVERALKSVYREVQSKVKGKELELLIAILPDNNGSLYG
DLKRICETDLGLVSQCFLTKHVFKRGKQCLANVALKINAKVGGRNTVLVDALSRRLPLVS
DTPTIIFGADVTHPHPGEDSSPSIAAVSDWPEVTKYAGLVCAQAHRQELIQDLYKTWVDP
QKGTMNGGMIRELLISFRSASGYKPGRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEP
NYQPLVTFVVVQKRHHTRLFANDHDDTRTTDKSGNILPGTVVDSKICHPTEFDFYLCSHG
GIQGTSRPAHYHVLWDENKFTADGLQSLTNSLCYTYARCTRSVSIVPPAYYAHLAAFRAR
FYMEPDASEAGSVHRNTAPRAGNCQDGSIRPLPALKDKVKKVMFYC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatccacaatactcgcagcattaccaagtaggaggaactagtggtggaagg
agtggaggtcagtatagtcaatcaagtagtggccgtggaggaggaggaacgggaggatat
catgggcagcagcagccgcgacaagctccagcagtgagcgcagtggtagagcaattttct
ggattgggtgtggaagttccagttcctgcgcaaccagcgccaccgcagccgagcgtcgta
gctcctccagcgtctagcaaggccttgagatttccgctgaggcccggacgcagccaaacg
ggggttaagtgcattgtcaaggcgaatcacttctttgcagagctaccagataaggatcta
caccactatgatgtgacgatcactcccgaggtgatatcgcgtggtgtgaatcgagcggtc
atggagcagctcgttaagtttcacagggattcgagtttgggtcacaggctcccagtgtat
gatggccggaaaagcctgtacactgctgggcctttacccttccattataaggactttcag
gtaagtctgccggaggaagatgatggatgtggtacaccgaggagagatcggcagttcaag
gtggtcatcaagttcgctgctcgtgctgatctgcatcatcttggccagtttctggccggg
aggcaagcagatgctcctcaagaggccttgcaagtgctggacatagtgctgcgagagctt
cctacccataggtattcgcctgttggacgatcgttttattcaccagacttaggacgtaca
caatccctcggtgacggcttagaaagctggcgagggttctaccagagtataaggcccacg
caaatgggtctttctctgaatattgacatgtcatttactgctttcattgagccgctgcgc
gtggtggactttgttggcaaactccttaacaaggacgtaagcaggccactttcggacgct
gaccgcatcaagatcgaaaaagctctgagaggggtcaaagtggaagttacacatcgcgga
accatgcgacgaaaatacaggatttctggcttaacttctcagcctactcaagaactaatg
tttcctgttgatgatagaggtacaatgaaatcggtaatggagtatttccgagatacatat
cactacactatacgaagcccatctttaccttgtttacaagttggaaatcaagaaagacca
aattatctgccaatggaggtctgcaagattgtggaaggacaaaggtatactaaacgtctc
aacgagcgtcaagtgacagcccttctaaaagtaacatgccaacggcccagggaaagagaa
ctcgatattttgcaaactgtttatcataatgcatataatcaagacccatacgcccaggag
tttgggatacgtatcagtgacagactggctctcgtggaagctagaatactgcctgcccca
cggctgaaatatcatgaaacgggtagagaaaaggattgcttgcctcaagacgggacctgg
catatgatgaacaagaaaatggtcgatggagggacagtgaactactgggcatgcgtcaat
ttctctcgtactgttcaagataatatagctcggggattttgtaacgaccttgctcagatg
tgtcttatttccggaatggcgtttgctgctgaacctatcattccagttcatgctgcacgc
ccagaccaggtagaacgtgctctgaagtcggtatatcgtgaagttcaaagcaaggtcaaa
ggaaaggaattagagttactgattgccatattacctgacaacaatggctcactttatggc
gacttgaaacgaatttgcgaaacagacctgggattggtttctcaatgcttcttgacaaag
cacgtctttaagagaggaaagcagtgtcttgctaatgttgcgttgaaaatcaatgccaag
gtcggaggcagaaacactgtcttggtggatgcactatctcggaggcttcctttagtaagt
gatacgccaacaattatatttggagcggatgttacgcatcctcatcctggagaagattcg
agtccctcgattgcagcggtaagtgattggccagaagtcacgaaatacgcaggtctagtg
tgcgctcaagctcacagacaagagttgatccaagatttgtataaaacatgggttgatcct
cagaagggaaccatgaatggcggtatgataagagagcttttaatttctttccgaagtgcc
tctggatacaaacctggaagaatcatcttctacagagatggtgtgagcgaaggacagttc
taccaagttctccttcacgagctggatgcaattagaaaggcttgcgcgtcactcgagccg
aactatcagcctctcgtgacgttcgttgtggtccagaaacggcaccacacccggctattt
gctaacgatcacgacgatacaagaaccactgataagagtggaaatatcctgccaggcact
gtggtggattcgaagatttgccatccaacggagtttgacttctacctttgcagccatggc
ggcattcagggaacaagcagaccagcacactatcacgtactttgggacgagaacaagttc
actgccgatggcttgcagtccctcaccaacagcctgtgctacacttacgctcgctgcaca
cgctcagtctcgatagtaccacctgcatactacgctcacctggctgcgttccgcgcgaga
ttctacatggagccggacgcgtccgaggctggctccgtccaccggaacactgctccccga
gctggtaattgccaggatggctccatccggccgctgcccgcgttgaaggacaaggttaag
aaggtcatgttctactgctag
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integrated database retrieval system
