Selaginella moellendorffii: SELMODRAFT_110501
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Entry
SELMODRAFT_110501 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_110501
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_110501
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_110501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Torus
zf-CCCH_DUS3L
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
zf-CCCH_PARP12
RING_XB3-XBAT31
zf-RING_UBOX
IBR_1
zf-CCCH_9
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
9660332
NCBI-ProteinID:
XP_002979289
JGI:
110501
UniProt:
D8S761
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
RILCKYYLHGACLKGDSCQFSHSFDDPSSNICTFYQRGVCSYGSRCRYEHVRLPRPKLPF
LPLLNAWQERPLVPPPAPSPSLATFDTFEPDPWEEFQAPDTASLDLADRPICSFAAAGYC
PYGNSCSNLHGDLCESCGKHCLHPFREAEREEHREQCVRSQKRLELLRMSQDIECSVCLE
RVLSKPSMSDRKFGILSGCDHPFCIACIRDWRGGTRPGMDLETIVRACPICRVSSHYVIP
SVVWYSNTEEKEEIVNGYKNKLSSIDCKYFEYGNSTCPFGTSCFYRHAYGDGTKEEVKLR
HLGAADGTTVIAKNIR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
agaattctctgcaagtattatctccacggcgcgtgcctcaagggcgattcctgccaattc
tcccacagcttcgacgatccatccagcaacatttgtacgttttaccagcgcggtgtttgc
tcctatggcagccgctgccgctacgagcacgtaagactccctcgcccaaagcttccattt
ttacctcttctaaacgcctggcaagagcgtcctctagtccctcctccagctccatcgcca
tctctcgctaccttcgacaccttcgagccggatccctgggaagagttccaagctccagac
accgcaagcttggatctggccgatcgtcccatctgttctttcgccgccgccggctactgc
ccctatggaaactcgtgctccaatctccatggcgatctgtgcgagagctgcggtaagcat
tgcttgcatccctttcgagaggccgagagggaagaacacagggagcagtgtgtgcgtagc
cagaagcgtctcgagttactccgcatgagccaggacatcgagtgtagcgtttgtttggag
cgtgttctgtccaagccttccatgtccgaccggaagtttgggatcttgtccgggtgtgat
catccgttttgcatcgcgtgtatacgagattggagaggtggcactcgccccggcatggat
ctggaaaccatcgttcgagcttgtccgatttgccgagtttcatcgcattacgtgattccc
agcgttgtttggtattccaacacggaggaaaaggaagagattgtaaacggatacaagaac
aagctcagttcgatcgactgtaagtattttgaatatggaaatagcacttgtccgtttgga
actagctgcttctacaggcacgcttatggtgatggtacaaaggaagaagtgaagctccgg
cacctgggagccgcggatggaaccactgtaattgcaaaaaatatcaggtga
DBGET
integrated database retrieval system