KEGG   Selaginella moellendorffii: SELMODRAFT_110695
Entry
SELMODRAFT_110695 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_110695
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_110695
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SELMODRAFT_110695
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_110695
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    SELMODRAFT_110695
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-C3HC4_2 DEAD zf-RING_2 zf-RING_UBOX Prok-RING_4 ResIII zf-RING_4 Rtf2 zf-ANAPC11 zf-rbx1 HDA2-3 zf-C3HC4_4 Zf_2nd_IFT121 zf-UDP Tubby_C_like zf-Nse DUF1272 RING_XB3-XBAT31
Other DBs
NCBI-GeneID: 9660160
NCBI-ProteinID: XP_002979128
JGI: 110695
UniProt: D8S716
LinkDB
Position
Unknown
AA seq 851 aa
MAVDFSAAADEEDAINEPILVGSLMAEVRGLAHHRGKLSSDGLAQLVRDPTNRFDTNAFR
VINERGEQVGYIQKEKAKSLAPLVDKGLAQLQCIGAGNGSSNRVSCEVFVFSLPAMVDAV
RDHLEYYGEQLRSPYDPPVDNVDDGRGGGGSDQRAPSIDDIFESMTAGAKIRQRMEADNS
VIKSSLMQHQKEALAWMVQRENSSALPPFWEKKGTTMYTNTLTNVTSAKRPESLRGGILA
DDMGLGKTLTVLALIATNKPGAVLPPIEDIKEPEQSQGGEPASKKLKTSDDKGKAKTAAP
VPVSNDGPPCVPAADGPRGTLVICPLSVLSNWESQLKDHTYPAGLKVHKYHGPNRTANAR
TLADYDIVFTTYNMLTERNSPLKKVHWLRLVLDEAHIIKNPRAQQTKSAVALNADRRWAV
TGTPIQNSAKDLLSLMQFLHFEPLNEQSFWTKTIQKPLTSGEPVGFARLQGLMSSISLRR
TKETKVNGKKLVDLPPKIITVFPVDLSPEDRSLYDKMEKDGRNMIRRFLDNGTVTKNYAV
VLQMILRLRQICDHTSMCPAEIVNMSTSSDTDTQAASPELLKKMLATLGDDFDCPICLAP
PSGAVITSCAHVFCRRCLEKVLEDEDKQCPMCHEELSEDDIFSSGKPDEEEDEELSNKND
VEDDDDKIDVKGVKPSAKINALISMLEKTRAKDPNIKSVVFSQFSTMLKLIEGPLQKAGF
KFVKLEGGMSASKREENMEAFKSTRSGSPTVFLLSLKAAGVGLNLVTASNVFMMDPWWNP
AVEEQAMDRVHRLGQTRDVHVFRLIATDSIEERLLQVQEKKRAYAQIALGKEASEQRKKK
CVEEVKLLMKC
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggcggtggatttctccgccgccgccgacgaggaggatgcgatcaacgagcctattctg
gtgggatcactcatggccgaggtgagaggtttagcgcatcatcgcgggaagctgtccagc
gacgggctcgcgcagctcgtccgcgatccgacgaatcgtttcgatacgaatgcgttccgg
gtgatcaacgagcgcggcgagcaagtcgggtacatccagaaggaaaaggccaagagtcta
gcgccgctggtggacaaggggctggcgcagctccagtgtatcggtgctgggaatggaagc
tctaacagggtctcgtgtgaggtcttcgtgtttagcttgccggcgatggtcgacgctgtc
cgggatcatctcgagtactatggcgagcagctgagaagtccttacgatcctccagtagat
aatgtagatgatggtcgtggtggtggtggtagcgatcaacgagctccaagcatcgatgat
atcttcgagagcatgacggctggagcaaagatccggcagcgcatggaagctgacaacagt
gtcatcaagtcctcgttgatgcaacaccagaaggaggctctggcttggatggtccagcga
gaaaactcgtcagctcttcctccgttctgggagaagaaaggcacgacaatgtataccaac
actctgacaaacgttacgtccgccaagcgccccgagtctctccggggtgggatcttagct
gacgatatgggactcgggaagacactcacggttctagcgctcattgccaccaacaagccc
ggtgctgttcttccaccgatcgaagacatcaaggagccagagcaaagtcagggtggcgag
ccagcctcgaagaagctcaaaacttccgatgacaaaggaaaggcaaagacagcagctccg
gtgcccgtttccaacgacggacctccctgtgttccagcagccgatggtcctcgaggaact
ctggtgatttgcccgctctcggtgctcagcaactgggagtcgcagctaaaggatcacacg
taccccgcggggctcaaagtccacaagtatcacggaccgaatcgcaccgccaacgccagg
actcttgcagactatgacatcgttttcacgacttacaacatgcttaccgagagaaattct
cctctcaagaaggtccactggctgaggctggtgctggacgaggctcacattatcaagaac
ccgagagcgcagcaaaccaagagtgcggtggccttgaatgccgaccggagatgggccgtg
acgggcactccaatccagaacagtgccaaggatctccttagtctcatgcagtttttgcat
ttcgagcctctcaacgagcagagtttctggacgaagactatacagaagccactgacgagc
ggcgagcctgttggattcgctcggctccagggacttatgtcttccatctcgctgaggaga
acgaaagagacgaaggtgaacggcaagaagctcgttgacttgcctcccaagatcattact
gtcttcccggtggatctcagccctgaagatcgcagtctgtacgacaagatggaaaaagat
ggcaggaatatgatccggcgcttcctggacaacggcacggtgacgaagaactacgccgtg
gtgctacagatgattctccggttgcgtcagatatgcgaccacacgagtatgtgcccggcg
gaaatcgttaatatgagcacttcatcagacaccgacactcaagcggccagtccagagctg
ctgaaaaaaatgctggccacgttgggcgatgatttcgattgtccgatctgcctcgctcct
ccttcgggagccgtgatcacatcctgcgctcacgttttctgccggcggtgcctcgagaaa
gtactggaagacgaggacaaacagtgtccaatgtgccacgaggagttgagcgaggacgat
atcttctcttctgggaaaccagacgaggaggaagatgaagagctgtccaacaaaaacgat
gtcgaggacgacgatgacaaaatcgacgtgaaaggagtgaagccgagcgccaagatcaac
gcgctgatatctatgctggagaagacgagggccaaggatccaaatatcaagtcggtggtg
ttctcccagttctccacgatgctcaagctcatcgaggggccactccaaaaggccggcttc
aagttcgtcaagctcgagggcggcatgagcgccagcaagagggaagaaaacatggaagcg
ttcaagtcgacacgcagtggctcgccgacggtgtttcttctcagcctcaaggccgctgga
gtgggattgaatctggtgacggcgtccaacgtgttcatgatggacccgtggtggaatccg
gcggtggaggaacaggccatggatcgagttcacaggctgggacagacgagagacgttcat
gtgtttcggctcattgccacggacagcatcgaggagaggctgctccaagtccaggagaag
aagagggcgtacgcacagatcgcgctgggaaaggaggcgtccgagcagcggaagaagaag
tgcgtggaagaagtgaagctgctcatgaagtgctag

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