Selaginella moellendorffii: SELMODRAFT_111128
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Entry
SELMODRAFT_111128 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SELMODRAFT_111128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_111128
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SELMODRAFT_111128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
9634787
NCBI-ProteinID:
XP_002979444
JGI:
111128
UniProt:
D8S805
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MSGADDGSVPLDVAQAEGQVWLLKLPAIVATAWNAQDSSGKSVAAGAGPADPTLAKVTCT
FDPLNPDPEAALEFTMELSGPDDIKAYSLNLQKDVVPTHIFSDTQGRLAVEGKVERKFDI
KPNSKAREEYRQLCRERDRKFNMKTRTIQVLKDDRGNLMRPALPPTIMLQSSKDAAKRKA
PVNAKNNDGKRTRRERGELEDHVFKLFEQQANWALKQLVQRTDQPVAFLKEILNDLCTYN
KRGTNQGTYELKPEYRKNPVEEKPADAAAP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcagacgatgggagcgtcccgctcgatgtcgcgcaggccgagggtcaggta
tggctgctcaagctcccagcgatcgttgccaccgcgtggaacgcgcaagattccagcggc
aagagcgttgccgctggcgcggggccagcggatccgacgctcgccaaagtcacttgcaca
ttcgatcctctcaatccagacccggaggccgcactagagttcacaatggaactttcgggg
ccagatgacatcaaagcttatagcctcaatctccagaaagatgtcgtgccaacgcacatc
ttttccgacacacaggggaggcttgccgtggagggtaaagtcgagcgaaagtttgatatc
aaaccaaacagcaaagctcgcgaggagtacaggcagctctgccgagagagggatcgaaag
tttaacatgaaaacgagaacgatacaggtcttgaaagacgatcgtggaaacctgatgaga
ccagctcttccaccgacgattatgttgcagtcatccaaggatgctgccaagagaaaagcg
cctgtcaatgccaagaacaatgacggcaagagaacgaggagagagaggggcgaattggaa
gaccatgtcttcaagctcttcgagcaacaggccaactgggctttgaagcagctcgtccag
agaaccgaccagcctgtggccttcctgaaggagattctcaacgatctctgcacttacaac
aagaggggaaccaaccaagggacttacgagctcaaacccgagtataggaagaatccagta
gaggaaaagcctgccgacgcagcagcaccttga
DBGET
integrated database retrieval system
