Selaginella moellendorffii: SELMODRAFT_111409
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Entry
SELMODRAFT_111409 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_111409
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SELMODRAFT_111409
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SELMODRAFT_111409
Prokaryotic type
SELMODRAFT_111409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
9635900
NCBI-ProteinID:
XP_002979676
JGI:
111409
UniProt:
D8S8R7
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
QILGTGMDSEDTMPSVLLFFDNKRFIFNAGEGMQRFCIDHILFTRVCSETCGGLPGNRFS
FFLSFLWVNIWGPSKLQFLLNAMSTFIPNSSILHAHIFGSDTMPQGGTIIDDDVVKISGT
LLQPCNGKNCEGTILLVPSVVYVCELPEVKGRFDPAKAVSLGLQPGQKYGQLQRGMTVET
DDGARTIHPDDVMEPSTSGPVFIVVDCPTVSHIPALTSAASLEALYSSPRTKAEVVCVVH
LSPSPVVEDAGYSCWMTRFAAAQHVLAGPGWSKTRCPIFKSSALLLAKLNMVCPRVFPFN
LGVDKSDTKFSEVKHSPVSISTELTCYYCRIHALWLLTTFSRQFQLLPLPLLGLEKSPAV
EDFNLEVIQTEFLNEIPELLSIKQDVKLLYDENALTTTAPACISSKADDLEIVFLGTGSM
HPSKHRNVSAIYLHLFERGGMLLDCGEGTYGQLKRRYGIQGADSVLANLKCIWISHIHAD
HQSGLTRILTARKALLQAQGRVQPILVIGPMFLRRYLTAYERLETLAMDFLDCSQTTIAA
GSYNSKFRDTLSLLCGGKRKHIDTGETGYDLATGLDATGRKKLDQVLQELGLKSLLSIPV
IHCAHSFGIVLESAQSGWKFAFSGDTRPCDAFVEAAKGATIFVHEATFDDGLLAEALEKN
HSLTCEAVQAGAAAGAYRTILTHFSQRYPQIPVFDASYNERTCIAFDMMSVNLVDLPLLP
KLVPVMKLMFKEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
cagattttagggactggaatggattcggaggacacaatgcccagtgttttgctctttttt
gataacaagcgcttcatcttcaatgctggagagggaatgcaacgtttttgtattgaccat
attcttttcactcgggtttgctccgagacttgcggtggtcttcctggtaatcgtttttct
ttctttctttcctttctttgggtaaatatatggggtccctctaagcttcagttcttactg
aatgccatgtctacgtttatcccgaactcttcaattctacatgcgcacatctttgggtct
gatacgatgcctcaaggaggaacgattatcgatgacgatgttgttaaaatatctggcact
cttcttcaaccttgcaatggcaagaactgcgaaggtactattctcctagtgccttccgta
gtctacgtttgtgagctccctgaagtgaaaggtagatttgatccagcaaaagcagtgagt
ttgggattgcagccagggcaaaaatatggacagcttcaaaggggtatgactgtggaaaca
gatgatggtgcacggactattcatccagacgacgtgatggaaccgtctacttctggacca
gtcttcatcgttgtagactgtccaacagtctctcatataccggctttaacttctgcagca
tcattggaagcattgtattcttctccaagaaccaaagcagaagtggtatgtgtcgtgcat
cttagtccttcacctgtggtcgaagatgctggatacagctgctggatgacaaggtttgca
gctgcgcagcatgtacttgcaggtcctggctggagcaaaacgagatgcccgattttcaag
tcaagtgctttgctgttggcaaaactgaatatggtttgtccgcgggtttttccgttcaat
cttggagtggataaaagcgacacaaagttttcagaggtaaaacattcccctgtttctatc
agcactgaactcacgtgttattattgtagaattcacgcgttgtggctgctcacaaccttc
tcaaggcaattccagcttctacctttgcctcttctgggcttggagaaatcccctgccgta
gaagatttcaatctcgaagtcatccaaacagagtttctcaatgaaattccagagctgcta
tctatcaaacaggacgtgaagctattatacgatgagaacgctttgacgacgacggctcca
gcatgtataagctccaaggcagatgacttggagatagttttcttggggacaggatctatg
cacccgtccaagcatcgaaacgtcagtgccatataccttcatctttttgagcgtggagga
atgctcttggattgtggagaaggcacgtatggacagctgaagagaagatatgggatccaa
ggcgccgattcggtcctagccaatctgaagtgcatttggatttctcacatccatgctgat
catcagagcggacttacacgcatactcacggctcgcaaggcccttttacaagctcaggga
agagttcagccaatcctggtgataggaccaatgttcctcaggcgctacttgacggcttac
gagagactagaaactctggcaatggattttctagattgcagtcaaacaaccatcgccgcc
ggctcatacaactcaaagttccgcgacaccttaagtctgctatgcggagggaagagaaag
cacattgacactggcgagacggggtatgatttagcaacaggacttgacgcaactggtcgg
aagaaactggatcaagtgctgcaggagctcggcttaaagtcactgctaagcattcccgtg
atacactgcgctcactcctttggaatcgttctagagtcggctcaaagtggctggaagttc
gctttctcgggtgatacaaggccctgtgacgcatttgtggaagctgcaaagggcgctacg
atctttgtccatgaggctacgttcgatgacggcttgctcgcggaagctctcgagaaaaac
cacagcctgacttgtgaagcggtccaggccggggcagctgctggagcttacaggacgatt
ctcacgcacttcagccagcgctatcctcagattccagttttcgacgcgagctacaacgag
agaacttgcattgcgttcgacatgatgagcgtcaacttggtggatttgccgctgctccca
aagttggtcccggtgatgaagctcatgtttaaggaagaatga
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