KEGG   Selaginella moellendorffii: SELMODRAFT_111873
Entry
SELMODRAFT_111873 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_111873
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_111873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_111873
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_111873
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SELMODRAFT_111873
  RNA polymerase III system
   RNA polymerase III
     SELMODRAFT_111873
  RNA polymerase I system
   RNA polymerase I
     SELMODRAFT_111873
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SELMODRAFT_111873
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 9647354
NCBI-ProteinID: XP_002980022
JGI: 111873
UniProt: D8S9V8
LinkDB
Position
Unknown
AA seq 96 aa
EAESEQVSDKPRKTTKYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRE
RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGN
NT seq 291 nt   +upstreamnt  +downstreamnt
gaggcggagagcgaacaggtcagtgataagcccaggaagacaaccaagtatatgaccaag
tatgagagagctcgcgttcttgggacacgggctttgcaaatcagtatgaacgctccagtg
atggtggaactcgagggcgagacagatccactcgagattgctatgaaggagctgcgtgaa
cggaagatcccttttacgattcggcggtacctccctgatggaagctacgaggattggggc
gtagacgagctgattgtggaggattcttggaagagacaagttggaaactag

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