Selaginella moellendorffii: SELMODRAFT_114410
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Entry
SELMODRAFT_114410 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
smo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_114410
04120 Ubiquitin mediated proteolysis
SELMODRAFT_114410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_114410
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_114410
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_114410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_11
Prok-RING_4
zf-RING_16
zf-HC5HC2H
Zn_ribbon_8
zf_RING_Vps8
zf-C3HC4_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
9647242
NCBI-ProteinID:
XP_002981293
JGI:
114410
UniProt:
D8SDA7
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MVKLGTYAAASVIGAVAVVYHAFYSREQFYPAMVYLSTSKISVLLLLNFAFVVLYAVWQL
IKMIFLGSLREAEVERLNEQLWRELMEVLFAMTIFREEFNVSFIAMVTVLLFVKAFHWLA
QKRVEYIEITPTVSRLSHARIASFMAFLLVLDSIFVHSSVSYLLRTKQASVSLFFAFEYV
ILATSVVSMFLKYSLYMGDMWMDGQWDNKAVYIFYLELVRDLLHLSLYLFFFLVIFINYG
LPLHLVRELYEIFRNFKARVTDFIRYRKVTSNMNERFPDATAEELGRSDATCIICREEMS
TAKKLPCGHLFHVHCLRSWLERQQTCPTCRSPVIAAEGGPQAASQRQQQQGQAPEAYFTF
AFSGQATPANAAEGNVSPEADQARARMQAAAAAAAQYGSSFVYPATGASGTMSWYFFFLL
VLTLFF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcttggaacgtatgcggccgcgagtgtgattggcgccgtggctgtggtctac
catgccttctacagcagggagcaattctacccggccatggtttacctcagcacctccaag
atcagcgttttactgctcctcaacttcgcctttgtggtgctctacgcggtgtggcagctg
atcaagatgatcttcctggggtcgctgcgcgaggccgaggtggagcggctcaacgagcag
ctgtggagggagctcatggaggttttgttcgccatgaccatcttccgggaggagtttaac
gtgtccttcatcgccatggtgacagtgctcctgtttgtcaaggccttccactggctggcg
cagaagagggtggagtatatcgagatcacgcctactgtctctcgcctctcccacgccagg
atcgcgtccttcatggcgttcctcttggttctcgactcaatcttcgtgcattcgtccgtg
tcgtatctcctccgaacgaagcaggcatcggtgtcgctctttttcgctttcgagtacgtg
atcttggcaacttcggtcgtctctatgtttctaaagtactcgctgtatatgggtgacatg
tggatggacggccagtgggacaataaggccgtgtatatcttttacttggagctcgttcgt
gatctgctccacctctcgctttatctcttctttttcctggttatcttcataaactatggt
ctgcccctgcatctggttcgtgaactctacgagatctttagaaacttcaaagccagggtg
accgactttatacggtatagaaaagtgacatccaacatgaacgagcggtttccggatgcc
actgcagaagagctgggacgtagcgatgcgacgtgcattatttgtcgcgaagagatgagc
acagcaaagaaactcccttgcggccatcttttccatgtccactgcctgcgttcgtggcta
gagaggcagcagacttgtccgacttgcagatctccagtcatagcagcagagggaggaccg
caggctgcatcacaaaggcagcaacagcaaggccaggcacccgaagcttattttaccttc
gctttttcaggacaagctacccccgccaacgccgcggaaggcaacgtatcaccggaggct
gaccaagcaagagcaaggatgcaagctgcggcagccgcggccgcgcaatatggctcgtct
tttgtttatcctgcaactggagcctctggaacaatgagctggtactttttttttcttctc
gttctcactctttttttctga
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