Selaginella moellendorffii: SELMODRAFT_114581
Help
Entry
SELMODRAFT_114581 CDS
T01496
Symbol
PGP19B-2
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_114581 (PGP19B-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_114581 (PGP19B-2)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_114581 (PGP19B-2)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_114581 (PGP19B-2)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_114581 (PGP19B-2)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_114581 (PGP19B-2)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_114581 (PGP19B-2)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_114581 (PGP19B-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
DUF87
Zeta_toxin
nSTAND1
AAA_19
Motif
Other DBs
NCBI-GeneID:
9647463
NCBI-ProteinID:
XP_002981381
JGI:
114581
UniProt:
D8SD68
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MEEEKQASVPLLKIFAFADGVDCAFMFGGTIGAVAHGVALPIFLLLFGKLLNSFGSLASD
PQEMYRQVSQYSLYFVYLGIAILFASWAEVALWMQAGERQVSRMRIVYLEAMLKQDISYF
DLEARTGDIVDNLSGNMLTIQEAIGEKMGGFLHFVSTFIGGFVVGFATVWQLGLVTLAIL
PVIAVVGGFYTKAITGIASKGQADTEPGNIVEEMTAQIRTVYSFVGETKALAAYTNALKK
SLKLGYKSGAAKGFGVGGLYGTMFCAWALLLWYGGVLVRKGDATGGSVLSTIFAVLIGGI
SLGQASPSIGALAKARAATQTILKAINHKPTINTSSKGETLSIVEGRVDLQDVHFSYPSR
PDIKVFEGFSLSIPAAKCVAIVGGSGSGKSTVVSLIERFYDPSSGRILVDGHDIRTLDLK
WLRSQIGLVNQEPALFATTIRNNILYGKPSATREEIEDAAKAANAHSFISQLPDGYETQA
GERGVQLSGGQKQRIAIARAILKNPSILLFDEATSALDAESEHVVQDALDKLMHGHTTVI
IAHRLSTVQNADTIAVVQEGKIVELGTHDELSSRGDGGAYATLVHLQNMAREVARDERQS
LKSQAGSTSMRRSSAEHSGLISFSRVRSFISRQSSTKSDGLVEGVELEAHEKKGSYFFRL
LKLNAAEWPFLLLGSAAAVVAGLVNPVFAMIISSVLSIYYNPDKSYMKSEVQKYSIIFVC
IGVSVGMIHSLLHYSFGVTGESLTKRIRELMFTAVTRFEVSWFDRDENGSSQIASKLSTN
AGFVRATMGDRVAIILQNSSLLVSAFLIAFIVEWRIALVVTASLPLLVASGISEQMFLKG
FAGNIEKAHERATKLTGEAVSNIRTVAAFNAEAKMVELVTDELEVPKRSSFVRGQIAGIG
YGVGSFFLFASFGLGLWYAGLVVRDGKASFGNAIKAFLVLVITSNGIGESLGLSPDIVKG
GQALKSVFAILDRKTEINPDDPSAETVKNMKGEIELRSVDFYYPTRPEVTIFKNLNLKVH
IGQSLAIVGASGSGKSSVISLVERFYDPVAGKVLVDGKDIRLLNLRSYRRFVGLVQQEPA
LFATSIQENIRYGKEDATESEIIEAATAANAHNFISALPDGYKTSVGERGAQLSGGQKQR
VAIARAVLKNPTILLLDEATSALDAESEHIVQEALDRLMKGRTTIVVAHRLSTIRNADKI
AVIQDGTIVEQGSHWELVAKADGAYSHLIKLQQQHSSPS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaagcaggccagcgtccccttgctcaagatcttcgcgtttgccgatggt
gtcgactgtgctttcatgtttgggggaactatcggagctgtggctcacggagttgccctc
ccaatcttcctcctcctcttcgggaagctgctcaatagttttggaagtctggccagcgat
ccacaagaaatgtatcgccaagtatcacagtactctttgtacttcgtgtatctgggaatc
gctatcttgtttgcctcctgggctgaggtagcgctttggatgcaagctggtgagcgtcaa
gtctccagaatgaggatcgtctacctggaagccatgctcaagcaagacatctcttacttc
gatctcgaggctcgaacaggtgatatcgttgacaatctttcgggcaacatgttaacaatt
caagaggcaattggtgaaaagatgggaggattcctacactttgtcagtacatttattggc
ggattcgttgtcggttttgctaccgtttggcagcttggccttgtaactttggccattctt
cccgtgattgctgtagtagggggattctataccaaagctatcacagggattgcgtcaaaa
ggccaggctgatactgagccaggaaacattgtagaagagatgaccgctcaaatacgtaca
gtttactcctttgtcggtgaaacgaaggccctcgctgcttatacaaatgctctcaagaaa
tcattgaagctgggatacaaaagtggagctgccaaaggctttggagttggaggactgtat
ggaaccatgttctgtgcatgggccttgctcctgtggtacggtggagtcctcgtcaggaag
ggagatgccaccggaggctcggttttgtcgacgattttcgccgttcttatcggtggtatt
tccttgggacaggcctctccgagtattggtgctctcgctaaagcgagagcagcgacgcag
acaatcttaaaggcgatcaatcacaagccaactatcaacaccagctcgaaaggcgaaaca
ctatccatagttgaaggacgtgttgacctccaggacgtgcactttagctatccctcacga
ccggatataaaagtctttgaaggcttttctttatcgatcccggcagcaaaatgtgttgcg
atcgttggcggtagtggctcagggaaaagcacggttgtgtcgcttatagagcgcttttat
gatccgagctcagggagaattcttgttgatggtcacgacatcagaactttggatctcaaa
tggttaagatctcaaatcgggcttgtaaatcaggagcctgctttgtttgccacgactata
cgaaacaatatcctttacggtaaaccatcagcaaccagggaagagatcgaggacgccgca
aaagcagcaaacgctcacagctttatctcacagcttccagacggatatgagactcaggct
ggagagagaggtgtccagctctcgggcggtcagaaacaacgtatagcaatcgcgagagcc
atcttgaagaatccctccattcttctcttcgacgaagcaaccagtgctttggacgcagag
tccgagcatgttgtccaggatgctctggacaagctcatgcacggacacacgaccgtgatc
atcgcgcatcgtctctccacggttcaaaacgccgacactatcgccgtcgtccaagaagga
aagattgtggagcttgggactcatgacgagctgtcctctagaggtgacgggggagcatac
gcgacgttagtacacctccaaaacatggccagagaagttgctcgagacgaaaggcaatct
ctcaagtctcaagctggatcgacctcgatgagaagaagcagtgcagagcatagcggcctg
ataagtttttcaagagtcaggagcttcataagccggcagtcaagcacaaagtcagacgga
ctggtcgaaggtgttgagcttgaagcgcacgagaaaaaaggctcctacttctttagactc
ctgaagctcaacgcagcagaatggccatttcttcttctcggaagcgcagcggcggttgtg
gcggggctcgtaaatccggtgtttgcgatgatcatcagcagcgtcttaagcatctattac
aatccggacaagagctacatgaagtccgaagtgcaaaaatactccatcatcttcgtctgc
ataggcgtcagtgtggggatgatacactccctcttgcactactcgtttggagtaactgga
gagagccttacaaagcgtatccgagaactcatgttcacagccgtcacaagatttgaggtg
agctggttcgatcgtgacgagaacggcagcagtcagattgcctccaagctatcgaccaat
gcgggttttgttagagccaccatgggagatagagttgctattatcctccaaaactcgtca
ctcttggtatcagctttccttatagcgttcattgtggaatggaggatagcacttgtcgtc
actgcttcgctgcctctactcgtcgcctcgggcatctcggagcaaatgttcctgaaaggc
tttgccgggaacattgaaaaggctcacgagcgagctaccaagctaaccggcgaggccgtg
agcaacatacgaacggtggcagcattcaacgccgaggccaagatggtcgagctagttact
gacgaactcgaagtcccgaagaggagtagcttcgttcgaggacagatagcgggaattggc
tatggtgtcggctccttcttcctgttcgcctcgttcggtctcgggctctggtacgccggt
ttggtcgtccgagatggcaaagcaagctttggcaacgccatcaaagccttcctcgtgctg
gttatcacctccaacggtataggggagtcactcggcttaagtccagacattgtgaaaggt
ggccaggctctcaagtcggtgtttgcgattctggacagaaaaacagagattaacccggac
gatccgagtgccgagactgtcaagaacatgaagggagagatcgagcttagaagcgtggac
ttttactatccaacaaggccggaagttaccatcttcaagaacttaaacttgaaggttcac
atcggccagagcctggcgatagttggagctagcgggtccgggaagagctcggtcatctca
ctagtcgagaggttctacgatccagtggcagggaaagttttggtggatggcaaggacatc
aggctcctcaacttacgatcatacaggcgcttcgtcggcctcgtccagcaagaaccggct
ctctttgcgacgtcgatccaggaaaacatccgctacggcaaggaagacgcgacggagagc
gagatcatcgaggcagcaacagcagcaaacgctcacaacttcatcagcgcgctgccggat
ggctacaaaaccagcgtcggcgagcgaggagcgcagctctcgggtggacagaagcaaagg
gtggcgatcgctcgagcagtgctcaagaacccgacgatcctcctgctggacgaggccacc
agcgcgctggatgccgagtcggagcacatcgtccaggaggcgctggacaggttgatgaaa
ggccggacgaccatcgtggttgctcatcgcttgtccacgatacgaaacgcggacaagatc
gcggtgatccaggatggaaccatcgtggagcagggaagtcactgggagctcgtcgcgaaa
gccgatggtgcttactcgcatcttataaaattgcagcagcagcacagttctccgagctag
DBGET
integrated database retrieval system
