KEGG   Selaginella moellendorffii: SELMODRAFT_114787
Entry
SELMODRAFT_114787 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
smo  Selaginella moellendorffii
Pathway
smo03030  DNA replication
smo03420  Nucleotide excision repair
smo03430  Mismatch repair
smo03440  Homologous recombination
smo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SELMODRAFT_114787
   03420 Nucleotide excision repair
    SELMODRAFT_114787
   03430 Mismatch repair
    SELMODRAFT_114787
   03440 Homologous recombination
    SELMODRAFT_114787
   03460 Fanconi anemia pathway
    SELMODRAFT_114787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smo03000]
    SELMODRAFT_114787
   03032 DNA replication proteins [BR:smo03032]
    SELMODRAFT_114787
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_114787
Transcription factors [BR:smo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    SELMODRAFT_114787
DNA replication proteins [BR:smo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    SELMODRAFT_114787
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     SELMODRAFT_114787
   MMR (mismatch excision repair)
     SELMODRAFT_114787
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     SELMODRAFT_114787
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 CDC24_OB3 Zn_ribbon_6 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 9647917
NCBI-ProteinID: XP_002981625
JGI: 114787
UniProt: D8SE38
LinkDB
Position
Unknown
AA seq 566 aa
MLSDGSMKAKAMLPTHMSAEVEAGKIQHLGLIRVLSHTTSVIPNLPNKALIVTDCEVVSG
ALDREVGSESSSSAQKTQCDEKPKFLSAPVKSAAQIVQEEHGRAAPAARMGVSRRVYPLV
SLTPYQGSWTIKVRVTSKGPLRTYRNARGEGSVFNVELTDEDGTQIQATMFKEAAEKFYP
MFELGKATSFLYQVYYVSNGNLRMANRQFSAVKNDYEMTLNASSGVEEVTEPDGKPGVIP
LVKYNFVKIEDLAAYVNKRELFDAIGIVQSVSSTMSVRRKVDNTEFAKREIVLVDQSQKT
VAVSLWSSLAVEDGAKLLEMLPDAPVVVIRSVRANDFQAGVSLSTSPNSMVWINPDIPEA
RELRSWYDESGKDATLTSVGAGLSQRAGSANDNRADISDITAPSVGEGKAAYFTVRACIS
YIKPDQTMWYTACSTCNRKVSEDSSRFWCEACQRHFDTASRRYIMLAKLTDHSGDAWVSF
FNDQAEQILGVSADELATIKSQDDDQRQYSSQLSKVVWSSYVFRVSVAQTEYLGEKRQRI
TIRAVNDTDWASESRLLLAKMKLESS
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgctgtccgatggatctatgaaagcgaaggctatgcttccgacccatatgtcggcggag
gtagaggcagggaagatccaacacttgggtctcatccgtgttctctctcataccactagc
gtgattccaaatctcccaaacaaagctctcatcgtcaccgattgcgaagtcgtcagtggg
gcactggatcgtgaggttggtagtgaatcatcatcgtccgcacagaagacccagtgcgat
gaaaagccgaagtttctttcggcaccagttaagtcggccgctcagatcgttcaagaggag
cacggaagagccgcaccagctgccaggatgggtgtgtcgaggagagtataccccctggtg
tctttaaccccttaccaaggtagttggacaatcaaggtgagagttacgagcaaaggtcca
ctgcggacgtatcgcaatgccagaggcgagggaagcgttttcaacgtcgaattgacagac
gaagatggaacacagattcaagctaccatgttcaaggaggcggctgaaaagttttacccg
atgtttgagctgggaaaggcgacttcttttctttatcaggtctactacgtttcgaatgga
aatctccgcatggctaacaggcagttttccgctgtcaagaacgactacgagatgaccttg
aatgcaagctcaggggtagaggaggtgactgagcctgatggaaagcctggtgtgattcct
ctggttaagtacaacttcgtgaagattgaggacttggcggcgtatgttaacaagagagag
ctttttgatgctattggaatagtgcaatcggtttcttcgacaatgagtgtaaggcgaaag
gttgacaacacagaatttgcaaagcgagaaatcgttcttgtcgaccaaagtcaaaaaacg
gttgccgtaagcctctggagcagtcttgcagtggaggacggagctaagctgctagaaatg
ctccctgatgcgcccgtagtagtaatccgatcggtgcgtgctaatgactttcaagcaggt
gtatctctgtcgacgtctcccaacagtatggtgtggataaatcccgacattcccgaggcc
cgagaacttcgatcctggtatgacgagagcgggaaagatgcaaccttgacgtcggtgggt
gctggtttgagtcaaagagcaggctcggcgaacgacaaccgtgcggatatctcagacatc
actgccccatctgttggcgaaggaaaggccgcatacttcactgtccgcgcttgcatcagc
tacatcaagccggatcaaaccatgtggtacacagcgtgcagtacatgcaatcgcaaagtt
agcgaggacagctctcgattctggtgcgaggcctgtcagcgacacttcgatacagccagt
cgtcgatacataatgctggccaagctaactgatcatagcggtgatgcatgggtttcgttc
ttcaatgatcaagccgaacagattttgggcgtgagtgccgacgagctagccacaatcaag
tcgcaagatgatgatcagaggcagtactcatcgcagctgagcaaagtggtgtggtcgtcc
tacgttttccgtgtcagcgttgctcaaactgagtacctgggcgagaagcgacagaggatc
acgattcgtgccgtgaacgataccgactgggccagcgagtcgaggcttttgttggccaag
atgaagctagaaagttcttag

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