Selaginella moellendorffii: SELMODRAFT_115028
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Entry
SELMODRAFT_115028 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08740
DNA mismatch repair protein MSH4
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_115028
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
SELMODRAFT_115028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_29
AAA_27
T2SSE
Motif
Other DBs
NCBI-GeneID:
9633892
NCBI-ProteinID:
XP_002981777
JGI:
115028
UniProt:
D8SEA9
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MDEQAARSSGFVVGVIENRAKEVGLAAFDLRTASLHLSQYIETSRSFQNTMTMLHFYNPS
ELILPATSPAFSSGSVALKAFCSRSDARKVELSRKWFDDTKGLLLIQSLALKDSNLCMSQ
GYSKQYYLCLGAAAAVVKWIESEKGVLLTNNSLRITFKGSADHMSIDITSVQSLQVIESS
ALAPINKLKKCGSLFGILSKTKSTGGARLLRANLLQPLRDMDTINTRLDCMDELTSKENL
FFGLNQVLQRFPKDLDRVISHFCFKPKKLGEGSSRSQSVVASVILLKEAMELLPALLQVL
QDAESTFFQRVKQTVCMRQCFSFIKQRIQETISEDVFNARMPFVARTQQCFAVKPGIDGF
LDVARKIFCDTSEAIHCLAKSYRENFQLPSLKLLYNKSKGFSISIPVAEFEQAGLPKTFI
QVVKHAKYVHCSTIELISLNTRNKKAADDCYARTEHCLEALTQDIREHVPSLMLLSESLS
LIDMITAFASMVSLKPAGSYVRPEFTEDGPIAIETGRHPILESLPSGDFVANNTFLSEAS
NMVIVTGPNMSGKSTYLHQVALITILAHIGCYVPAQFASFRVVDRLFTRIGEADDMEMNS
STFMREMREAAYFVQNVTPRSLILIDELGRSTSSYDGLALAWSFSEYLLSLKAYVIFATH
MQKLGELSTIYPNVKVSFFAVNINNNRLNFEFTLREGCTSIAHYGLLLSNVVGLPPSVIQ
GARRVIDALESRESKALETYRLSSTGRSLQKDYHVAQRLLTLKQAKMEPDVLRGYLAKLQ
QSCLE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcaggcggcgcgatcgtccggttttgtggtaggagtgatcgagaacagggcc
aaggaggtaggactggcggcattcgatctgagaacagcatcgctgcatctttcgcagtac
atcgagacgagtcgctcgttccagaacacgatgacgatgctccatttctataatccctcc
gagctcattcttccggcgactagtccggcgttttcttccgggtccgtggctctcaaagcc
ttttgcagccggtccgacgcacgaaaggtggagctgtcccgaaagtggtttgatgataca
aagggcctccttttgatccaaagcctggctttgaaagattccaatctttgtatgtctcaa
ggctacagcaagcagtactatctttgtctcggtgctgccgctgctgttgttaagtggatc
gaaagtgagaaaggtgtcttgctcacgaacaattccctgcggattacattcaaaggttcg
gcagaccacatgagcatagacattacaagcgtgcagagccttcaagtgatcgagtcgagt
gctctggcaccgattaataaactgaagaaatgcggaagcctgtttgggatattgagcaag
acaaaatcaactggaggcgcgagacttcttcgtgcgaacctcctacagcctttaagagac
atggacaccatcaacacacgtctcgattgcatggacgagttaacaagcaaggagaacctt
ttctttgggttgaatcaggtgcttcaaagattcccaaaagatcttgacagggtcatctct
cacttttgcttcaagccaaagaagctcggtgaaggatcttcaaggagtcagtcggtggta
gcgagtgttatactcctcaaagaagcaatggaacttctccctgcgctgctccaggttctt
caagatgcagagagtacgtttttccaacgcgtcaaacaaacagtttgcatgcggcaatgc
ttttcttttataaagcagagaatacaggaaactatctctgaagacgtttttaacgccagg
atgcctttcgttgctcgaactcaacagtgttttgcagtgaaaccaggaatcgacggtttt
ctggatgttgcccgaaagatcttctgtgatacaagcgaagcgattcattgcctcgcaaag
tcataccgcgaaaactttcagcttccgagtctaaagttgctttataataagtcgaaaggc
ttttctattagcattccagtggctgagtttgagcaagctggccttcccaaaacgtttatc
caggtagtcaagcatgcgaaatatgtacactgctctacgattgagttaatctcacttaat
accaggaacaaaaaggccgcggatgattgttatgcgaggacagaacactgcctggaagct
cttacccaagatataagggagcatgttccttctttgatgctgctcagcgagtctctctcc
ttgattgatatgatcacagcgtttgcttccatggtttcgctgaagcctgctggtagctac
gttcggccagaatttactgaggatgggcccatagcaattgagaccgggaggcatcctatt
ctggagagtcttccttctggagattttgtggcaaacaatactttcctatccgaagcatcg
aatatggttatcgtcacaggtcctaacatgagcgggaaaagtacgtatctgcatcaagtc
gcccttataaccatactagcacatattggatgctacgttcccgctcaattcgcctcgttt
agagtggtggaccgactgttcaccagaatcggggaagctgacgacatggagatgaactcc
agtaccttcatgagggaaatgcgggaggctgcatactttgtgcagaatgtgactcccagg
agcttaattcttatcgatgagcttggtcgatcaacctcatcttacgatggactggctcta
gcctggagtttcagtgagtacttactgtcgctgaaggcgtacgtcatttttgcaacgcac
atgcagaagcttggagaactgtccacgatctatccaaacgtgaaggtgtctttttttgct
gtcaatatcaataacaaccgtctcaactttgagtttacgctccgagagggctgcacgagt
atcgcgcactacgggttactgctgtcaaacgttgtgggcctaccgccttcggtgattcaa
ggggccaggagagtgatcgatgctctcgagagcagggagtcaaaagccctggaaacatat
aggctgtcatcaaccgggagatccctgcaaaaggattaccacgttgcgcaaaggctgctt
acgctcaagcaggcaaaaatggagccggacgttctgcgtggctatctcgcgaagctccaa
caaagttgcttggaatga
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