KEGG   Selaginella moellendorffii: SELMODRAFT_115108
Entry
SELMODRAFT_115108 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12862  pleiotropic regulator 1
Organism
smo  Selaginella moellendorffii
Pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_115108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_115108
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_115108
Spliceosome [BR:smo03041]
 Complex B
  Other components
   Prp19 complex
    SELMODRAFT_115108
 Complex C
   Prp19-CDC5 complex
    SELMODRAFT_115108
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    SELMODRAFT_115108
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_NOL10_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_WDR11_2nd Beta-prop_HPS5 MbnP
Other DBs
NCBI-GeneID: 9648287
NCBI-ProteinID: XP_002981714
JGI: 115108
UniProt: D8SEF0
LinkDB
Position
Unknown
AA seq 341 aa
SAAVMRRLPSRWPKPEWHAPWKNYRVISAHLGWVRAIAFDPGNEWFCTGSADRTIKIWDT
ASATLKLTLTGHVEQVRGLAVSPRHPYMFSAGDDKQVKCWDLEYNKVIRSYHGHLSGVYC
LTLHPTLDILLTGGRDSVCRVWDMRTKAQIFALSGHDNTVCSVITQATDPQVVTGSHDCT
VKLWNLAAGKTLSTLTFHKKSVRALALHPLQPAFASASADNIKKFSLPRGEFVHNMLSQQ
KAIVNCMALNEENVLVTGGDNGSIWFWDWTSGHNFQQTQTIVQPGSLDAEASIFAASFDI
TGTRLVTCEADKTIKMWRQDENATPQTHPLNFRPPRDIRRF
NT seq 1026 nt   +upstreamnt  +downstreamnt
agtgcggctgtaatgcgaaggcttcccagtaggtggccgaagccggagtggcatgctcca
tggaagaactatagagttattagtgctcacttgggatgggttcgagcgatagctttcgat
ccaggaaacgagtggttctgtacgggatctgcagatcgtacaataaaaatttgggatact
gcctcagctaccctgaagttaacgttaacaggtcatgttgagcaagttcgagggctggct
gttagtccacgccatccttacatgttttcggctggagacgacaagcaagtgaaatgttgg
gatctcgaatacaacaaggttatccgatcctaccatgggcacttaagtggagtttactgt
cttacgcttcatcctactctggatatactcttaacaggaggaagggattccgtctgtcga
gtctgggatatgcgcacaaaagctcaaatctttgctctatctgggcacgacaacactgta
tgctcggtgataacacaagccacagatccacaagtggtgactggatctcacgactgcacg
gtcaagctatggaatctagcagcaggaaagacactctcgactttgacatttcacaaaaag
tcggtgcgcgcactcgccttgcatccgctacagcccgcgtttgcatctgcctcagcggac
aatattaagaagttcagcttgccgaggggcgagtttgtgcacaacatgctctcacagcaa
aaggctatcgttaactgcatggctttgaacgaagagaacgtgcttgtaacaggaggtgat
aacggaagcatctggttctgggattggactagcggccataacttccagcaaactcaaacc
atcgttcagccaggttcgctggatgccgaagcgagtatctttgcggcttctttcgacatc
accgggacccgacttgtaacttgcgaagctgacaagacgataaaaatgtggaggcaagac
gagaacgccacgcctcagacgcatccgctcaacttcaggcctccaagggacattcgaagg
ttttag

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