Selaginella moellendorffii: SELMODRAFT_115361
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Entry
SELMODRAFT_115361 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_115361
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_115361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
TIG
Motif
Other DBs
NCBI-GeneID:
9634848
NCBI-ProteinID:
XP_002981884
JGI:
115361
UniProt:
D8SF47
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
CALGFAAGVVGGANGLAYVVTNPQDDDPKIPVPGTLRYGVSLGNSDGNGVWITFAGNMTI
FLQEMLWIRSMTTIDGRGFNVTITGRNLVLGGVSNVILHNLQISSVGESDTIHIYAGSKK
IWVDHVSSWDARLGLVSVLQGSTDVTISNSLLTNPNFNMLLGASDADTEDKIMKVTVYRN
WFKDSTQRMPHCRWGYCHVVNNLYTNWGYYAIGGRVNAKILSDNNVFVAGRRSEVTPWFS
LHGPEFDTTATITSSNDLFLNGSTFHQFMGVEPMSLTEVPPAYPTPDHNPPIHSTSTLPQ
FLEQCAGAIFGDSLARCMFASSKV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
tgtgctcttggatttgcagctggagttgtgggaggagcaaatggcctggcctacgttgtc
acgaatccacaagacgatgatcccaaaataccggtgccaggaactctgagatatggggtc
tctctcgggaactccgatggaaatggcgtgtggataacttttgccgggaacatgaccatc
ttcctccaggagatgctctggattcgaagcatgacaaccatcgacgggcggggcttcaac
gtaacaatcaccggaagaaacttggtgctcggtggcgtgagcaatgtcatcttacacaac
ctccagattagctcggtgggcgagagtgatacgatccacatctacgccggctccaagaag
atctgggtcgaccatgtatcctcctgggacgccaggctcggcctcgtctcggtgctccaa
ggatccacagacgtgacaatctccaactcgcttctcacaaatccaaactttaacatgctc
ctcggggcatctgatgctgatactgaggacaagatcatgaaagtcacggtctacagaaat
tggttcaaagattcaacgcaaagaatgccacactgcagatggggttactgtcacgtcgtc
aacaatctatacaccaactggggctactacgcgataggtggaagagtgaacgccaagatc
ttaagcgacaacaatgtatttgtagctggccggaggagcgaagtcacgccatggttcagt
ctgcatggtcccgagttcgacaccaccgcaaccatcacgtcctccaacgatctcttcctc
aatgggtccacctttcaccagttcatgggtgttgagccaatgtctctgaccgaagtccct
cccgcgtatccgaccccggaccacaatcctccgattcactccacgagcacactgccgcaa
ttcttggagcaatgcgcaggagcaatttttggcgatagtctcgcgagatgtatgtttgct
tcctccaaagtttaa
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