Selaginella moellendorffii: SELMODRAFT_115849
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Entry
SELMODRAFT_115849 CDS
T01496
Symbol
ABH1-1
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03015
mRNA surveillance pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_115849 (ABH1-1)
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_115849 (ABH1-1)
03015 mRNA surveillance pathway
SELMODRAFT_115849 (ABH1-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_115849 (ABH1-1)
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_115849 (ABH1-1)
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
SELMODRAFT_115849 (ABH1-1)
Spliceosome [BR:
smo03041
]
Common components
Common spliceosomal components
Cap binding complex
SELMODRAFT_115849 (ABH1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
9635931
NCBI-ProteinID:
XP_002982120
JGI:
115849
UniProt:
D8SFU6
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MGSSEADASWRGYVIRIGDRCPEYGQAEADEHIETCSMVIARDLRQYEDEILDVLIQCAE
ELPHKLPFYGAVVGLTNIEEANFVSRIVERVHSRLQDALNTEDCNRLRILLRFLAVLMCN
NVISSTSLVEVFETLLSSAATTVDEEVGNPAWQPRADFYVSCILSSLPWCGFELQERAPE
ELERVMAAVEAYFSLRMQRPDSLLTPFYVDSSGTSPITGQDYVQEFWSRTQQLQQAGWKA
DSVPRPYASFESRLVTSQTLHQLKALACPAIPKPHTGPKDLAFGRQTHEAETKYPQRTGR
LRVFPPENSEKDMAPIDCFIVEEYLLDIMLYLNGSRKECAAFMVGLPVPFRYDYLMAEVV
FGQMLLLPKPPFKLIYYTIVIIDLCKALPGSFPGLLAAVVRNLFSRISELDVECRSRLST
WLSHHMSNFQFIWPWSDFAHVAEQPAWSPQRVFVQETLEKEVRLSYWERLFSPVKSEWQS
LDDSPKLCDLLPPKNTPEFRFSRDNQVEGLETETGFASELLAQIKTKKGMKDIESWFESK
IVPAAGQKVAIEILLQTLLNLGSKSFTHMVTVLERYGQLIATLAPDETLQVHVIDEVARF
WQNSSQMIAIVVDRMMGYRLVSNLAVIRWSFKDENVQTFHTSGRVWELLGNAINKAGNRT
ADLQRDVVNAKRALDEADGAVSKAERNRSNVQELIDSAETDDARKQATSKMEWVKTTVVK
ARGRQTAAQDLLETKEALLSGALREQDTLVCLVFQNLVSTISSKLSKSDADGADTAEPEP
MDVDADPSAAATEGNNNENNENQNERYKKSHWQRCTMGHLEAFCRQYAAEVWQMIEKLDQ
EVFTENANQEVIKVVYSAIKRPILDKN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggggagtagcgaggcggacgcgtcttggcgcggctacgtgatccggattggcgatcgc
tgccccgagtatgggcaggcggaagctgacgagcacattgagacgtgctccatggtcatc
gcgagggatttgaggcagtacgaggacgagattctcgatgttttgatccagtgtgccgag
gagcttccacacaagctgcccttttatggcgctgtggttggtctcacgaacatagaggag
gcaaattttgtttctcgaatcgttgagagagttcacagtcggctccaggatgcactcaat
accgaggattgtaacagattgagaatacttttacggttcctggcggtgttgatgtgcaat
aacgtcatctcgtccacctccctcgttgaagtgtttgaaacgctcctgtcttcagccgca
actactgttgatgaagaagttggaaacccggcctggcagccgcgagctgacttctacgtt
tcgtgtatcctgtcatcgcttccttggtgtggattcgagctgcaagagcgagctccggag
gagcttgagcgggttatggctgctgtagaggcatattttagccttagaatgcagagaccg
gattccttactcactcctttctacgtggattctagtggaacttctccaatcacgggtcaa
gactacgtacaggagttttggtccaggacacaacaattgcaacaagctggatggaaagct
gacagtgttccgaggccatatgcttctttcgaatctcgactagtgacgtctcagaccctt
caccagctgaaggctctagcttgcccagctataccaaaaccacatactggtccaaaggat
ttggcttttgggaggcaaactcatgaagcggaaaccaaataccctcaaagaaccggtcgt
ttgcgggtttttcctccagaaaattcagagaaggatatggcccctatcgattgcttcatt
gtggaagagtatttgctggatataatgttgtacttgaatgggagtcgcaaagaatgcgca
gctttcatggtagggctgcctgtgccatttcgttacgactaccttatggctgaagttgtt
ttcggacagatgcttttacttcccaagcctccttttaagctgatttattacactatagtt
attattgatctctgcaaggctttacctggttcttttccgggcttgcttgctgcggtcgta
cgaaatctgttcagcagaattagtgagctagatgttgaatgcagatctcgtctcagcaca
tggctttctcatcacatgtctaattttcaatttatctggccatggagcgattttgctcac
gttgctgagcaaccggcatggtcacctcaacgagtctttgttcaggagacgttggagaag
gaagttcgcttgtcatattgggaaagacttttctcacctgtgaaatctgaatggcagagt
ttggacgattctccaaagctctgtgacttgcttcctccaaaaaacactccagagttcaga
tttagtcgggacaaccaagtagaaggtttggagacagagacggggtttgcttctgagtta
ctggcacagatcaaaacaaagaagggaatgaaagacatagagtcgtggtttgaaagcaag
attgttcctgctgctggtcaaaaagttgcaatcgagatccttcttcaaacacttctcaac
ttggggtcaaaaagtttcacacacatggtcactgtgctcgagagatatggtcaactcatt
gctacgcttgcaccagatgagacgttacaagtacatgtgatcgacgaggttgccaggttc
tggcagaattcatctcaaatgatcgcgattgtggtggaccgcatgatgggctacaggttg
gtatccaatctggcagttatcaggtggtcctttaaggacgaaaacgttcaaacttttcac
acttctggccgggtctgggagcttctgggaaatgcaatcaataaggcaggcaatcgcacc
gcagaccttcaaagggatgtggtaaacgctaaaagagcactagacgaagctgatggagca
gttagcaaagccgaaagaaaccgatcgaacgttcaagagctcattgattcggccgagact
gacgatgcacggaaacaagctacgtctaagatggagtgggtcaaaacgacggttgtaaaa
gcaagaggtcgacaaactgctgctcaggatctacttgaaacgaaggaggctttactctcg
ggagctctcagggagcaagacacgcttgtgtgtttggtgttccagaaccttgtgtcaact
atatcttccaagctttcaaaaagtgacgctgatggtgctgatactgcggagccggaacct
atggatgtcgacgctgatccttctgcagctgcaacagaaggcaataacaacgagaacaac
gaaaaccagaatgaaaggtacaaaaaatcgcactggcaaagatgcacgatgggacacctt
gaggcattttgtcgccagtacgccgcagaggtctggcagatgatcgagaaactcgatcaa
gaagtgttcacggaaaatgcaaaccaggaagtcatcaaagttgtctactctgccattaag
cgcccaatcttggacaagaactaa
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integrated database retrieval system
