Selaginella moellendorffii: SELMODRAFT_116103
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Entry
SELMODRAFT_116103 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_116103
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_116103
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_116103
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_116103
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_116103
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_116103
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_116103
Exosomal proteins of bladder cancer cells
SELMODRAFT_116103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-GeneID:
9636252
NCBI-ProteinID:
XP_002982322
JGI:
116103
UniProt:
D8R691
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAGLAPETSQFDPRQYDQKMEFALEGDDVISSWDEVNETFDSMGLHENLLRGIYAYGFEK
PSTIQQRGIVPFCKGIDVIQQAQSGTGKTATFCSGILQQLDYNNVECQALVLAPTRELAQ
QIEKVMRALGDYLQVKVHACVGGTDVRQDQRILQAGVHVVVGTPGRVYDMLRRRALRPDY
IKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGLFSATMPPEALEITRKFMNKPVRIL
VKRDELTLEGIKQFYVNVEREDWKLDTLCDLYETLAITQSVIFCNTRRKVDWLTDKMRSR
DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN
YLHRIGRSGRFGRKGVAINFMVREDERMLHDIQKFYNTVIEELPNNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttggcacccgagacctctcaattcgatccccggcagtatgaccagaagatg
gagtttgcgttggaaggagacgatgtgatatcgagctgggacgaggtgaacgagacattc
gactccatgggcttgcacgagaatctgctgcgagggatctacgcctacggctttgaaaag
ccctctaccatccagcagaggggaatcgtgccgttttgcaaggggattgacgtgatccag
caggcccagtccggcaccggcaagacggccacgttttgctccggcatcctgcagcagctc
gactacaacaatgtcgagtgccaggcgctggtgctggcgcccaccagggagctggcgcag
cagatcgagaaggtgatgcgggcgctgggtgactacctgcaggtgaaggtgcacgcctgc
gtcggcggcaccgacgtccgccaggaccagagaatcctgcaggccggcgtccatgtggtg
gtaggcactcctggtcgcgtctacgatatgctcaggcgtcgcgcgctgcggccggactac
atcaagatgtttgtcctggacgaggcggacgagatgctgtcccgcggtttcaaggaccag
atttacgacatcttccagctccttccctccaaggtccaggtgggcctcttctccgccaca
atgccgcccgaggcgctggagatcacccgcaagttcatgaacaagccggtgcgcattctc
gtcaagcgagacgagctgacgctggagggtatcaagcagttttacgtgaacgtggaacga
gaggactggaaactggacacgctgtgcgacctgtacgagacgctggccatcacgcagagc
gtcatcttttgcaacacccggcgcaaggtggactggctcaccgacaagatgaggagccgc
gaccacaccgtgtctgcgacgcacggcgacatggaccagaacacccgcgacatcatcatg
cgcgagttccggtcgggctcgtcccgcgtgctcatcaccaccgacttgctcgcgcgcggc
atcgacgtccagcaggtgtcgctggtgatcaactacgaccttccgacgcagccggagaat
tatctgcatcgaattggtcgcagcggtcggtttgggcggaagggcgtggccatcaacttt
atggtgagagaggacgagaggatgcttcatgacatccagaagttttacaacactgtcatt
gaggagctgccaaataacgttgcggacctcatctaa
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