Selaginella moellendorffii: SELMODRAFT_116887
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Entry
SELMODRAFT_116887 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
smo
Selaginella moellendorffii
Pathway
smo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SELMODRAFT_116887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_116887
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
SELMODRAFT_116887
Prokaryotic type
Archaeal type
TFE
SELMODRAFT_116887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Dimerisation
Sec2p
HTH_20
Trp_dioxygenase
MarR
TTRAP
GntR
Motif
Other DBs
NCBI-GeneID:
9661665
NCBI-ProteinID:
XP_002982523
JGI:
116887
UniProt:
D8SGW9
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
LARLVRLVARAFYDDEIPHKGANPGKSGKSDNKGISVVVLDALTRRQWVKEEELAKRLKL
HPKQLRRTLRVLEDEMLVIREDHKETTKNAKVYNAAVAVADGEQQGGPANEKTKALLHSY
CCLDYAQICDVVRYRIHRAKKMIKDELEDKNTVQEYVCPDSGCGRRYSALDASRLISPVD
MNFHCERCDAELVANNDKLAPKDLGEGNNEENARRRQREKLKEMLERMEVQLKPLTDQLA
KLKDLTPPDYGSFSQWQERTLAQARGDGDGDHKTANGERPSVPMPFLGETKARVEVAFAG
SDTKEAVKEDPGKSMKVLPPWMIRQGMSLTAQQRGEVKTEEGASSDTKPTVAATMDEKPM
SAERQLQEEYVKAYYAALMLQQQQQQQQQQQPPGDALDEVKKEEPDQENGFAAIAGDRVV
GAKSKRDDAEDDVEWEEEAPSTGLRSPILFASIAKLC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
cttgccaggctcgtgaggctggtggcgcgagcgttctacgacgatgagatcccccacaag
ggcgcaaaccctggcaagtccggcaaatcggacaacaaggggatcagtgtggtggtgctg
gatgcgctgacgagaagacaatgggtgaaagaggaagagctggccaagaggctcaagctc
catccaaagcagctccgccggacgctcagagttctcgaggacgagatgctggtgattcga
gaggaccacaaagagacgaccaagaatgcaaaggtttataatgcagctgtggctgtcgct
gatggcgagcagcaaggtggtcctgccaacgaaaagacgaaggctcttctacattcgtac
tgctgcttagattatgctcagatttgcgatgttgttagatataggatacaccgcgcgaaa
aagatgatcaaggacgaactcgaggacaagaacactgtgcaagagtatgtttgtccggac
tctggttgtggtaggagatactccgctctggatgcatcaaggctgatcagcccagtggat
atgaacttccattgcgagagatgtgatgccgagcttgttgcaaacaatgataagctagcg
cctaaagaccttggcgaagggaataatgaggaaaacgcgaggcggcgccaacgcgagaaa
ctcaaggagatgcttgagcgcatggaggtccagctaaaacctttgacggaccagctcgca
aagctgaaagatctgacccctccggactatggatcattttcgcaatggcaagaaaggacg
ctggcgcaggccaggggcgacggagacggtgatcataaaactgctaatggagaacgaccg
agcgtaccgatgccgtttctgggcgaaaccaaggcaagagtggaagtggcttttgctggc
tcggatacgaaggaggctgtcaaagaggatcctggaaaatccatgaaagttcttccgcct
tggatgatacggcagggaatgtctctaacagcacagcaacggggcgaagttaagaccgag
gagggtgcttcctccgacacaaagccaaccgtagcggcaacgatggacgagaagcccatg
tccgccgagaggcaactacaggaggaatacgtgaaggcttactacgcagcgctgatgctc
cagcagcagcagcagcagcagcagcagcaacagccgccaggcgatgctctggacgaagtc
aagaaggaagaaccggatcaagagaatggttttgctgcgattgctggagatcgtgttgtg
ggggccaagtcgaagcgagacgatgccgaagacgatgtagaatgggaggaagaagctcca
tccacaggtttgcgttctccgattttattcgcttccatcgctaagctttgctaa
DBGET
integrated database retrieval system
