Selaginella moellendorffii: SELMODRAFT_117446
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Entry
SELMODRAFT_117446 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
smo04141
Protein processing in endoplasmic reticulum
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_117446
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_117446
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_117446
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_117446
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_117446
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_117446
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_117446
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_117446
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_117446
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_117446
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_117446
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
SELMODRAFT_117446
Spliceosome [BR:
smo03041
]
Complex B
Other components
Prp19 complex
SELMODRAFT_117446
Complex C
Prp19-CDC5 complex
SELMODRAFT_117446
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SELMODRAFT_117446
Chaperones and folding catalysts [BR:
smo03110
]
Heat shock proteins
HSP70 / DNAK
SELMODRAFT_117446
Membrane trafficking [BR:
smo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
SELMODRAFT_117446
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
SELMODRAFT_117446
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
SELMODRAFT_117446
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
SELMODRAFT_117446
Exosome [BR:
smo04147
]
Exosomal proteins
Proteins found in most exosomes
SELMODRAFT_117446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
Ppx-GppA
Hydantoinase_A
FtsA
Toxin_SdpC
FGGY_C
ARS2
Motif
Other DBs
NCBI-GeneID:
9654179
NCBI-ProteinID:
XP_002982966
JGI:
117446
UniProt:
D8SIJ6
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MASVFFSPPSPPAPSPSKLRFLQGNAARRFPAGNLHLHARNTRRRSGVVASAADLREKVV
GIDLGTTNSAVAAMEGGKPTIITNSEGQRTTPSVVAFTKNGEKLVGQIAKRQAVFNPSNT
ISSVKRFIGRKMAEVDEESKQVSYAVVSDENGNVKLHCPAAGKTFAAEEISAQVLRKLVD
DACNFFNDKVSKAVITVPAYFNDAQRTATVDAGRIAGLEVLRIINEPTAASLAYGFDKKA
NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKKDEGI
DLLKDKQALQRLTETAEKIKIELSLLTQTSISLPFITATSDGPKHIDTTITRAKFEELCS
DLLDRCCTPVENALKDAKLEFKDINEVILVGGSTRIPAVQEVVKRLTGKTPNLSVNPDEV
VALGAAVQAGILAGEVSKVVLLDVTSLSLGLETLGGVMTKVIPRNTTRPATKSEVFSTAA
DNQTSVEINVLQGEREFVKDNKSLGSFRLEGIPPAPRGVPQIEVRFDIDANGILSVSATE
KGTGKKQDITITGASTLSQDEVERMVQEAERFRAEDEKKRGDVDARNEAESLVYQTEKQV
EELGGKVPADVKSKVEDKVKALKVEMSSGDTRKIKDAIAALRQEAMQIGQSLYSQAGTKE
AKETKGTKETKDGSDGDEVIDADFSS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgtcttcttctcgccgccgtcgccaccggcgccatcgccaagtaagctcaga
tttcttcaaggaaatgctgctcgtcgcttcccggctgggaatctccatctccacgctaga
aatacgaggcggcgatccggcgtggtggccagcgctgccgatctgcgagaaaaggtcgtg
gggatcgatttggggaccacgaattccgcggttgcggcgatggagggtggcaagccgacg
atcatcacaaactctgaggggcagcgcaccactccctcggtggtggctttcacgaagaat
ggggagaagctcgtcggccagatcgccaagcgccaggccgtgtttaatccctccaacacc
atctcctcggtgaagagatttatcggcaggaagatggccgaggttgacgaggagtccaag
caggtctcctatgctgtcgtgagcgatgagaatggaaatgtgaagctccactgccctgcc
gctggcaaaaccttcgctgccgaggaaatctcagctcaggtgttgagaaagcttgtggac
gatgcttgcaactttttcaacgacaaagtgagcaaggctgtgatcacagttcctgcgtat
ttcaacgacgcacagagaactgccacggtcgacgccggaaggattgccggactagaggtt
cttcgtattatcaacgagcctacggcggcgtctctggcttatggtttcgacaagaaagcc
aacgagaccatcttggttttcgatctggggggtggtacatttgatgtttcagtgctggaa
gttggtgatggcgtttttgaagtcctgtcgacatcaggagacacgcacttgggtggagac
gattttgacaagagaattgttgactggctagcgtccaacttcaagaaagacgaaggaatc
gatcttctcaaggacaagcaagcacttcaaaggctgacagagactgcagagaagatcaag
atagagctttcgttactcactcagacaagcatcagcctgccatttattactgccacttca
gatggtcctaagcacattgacacgacgattactcgggctaagtttgaggaactgtgttct
gatcttctagacaggtgctgcacaccagtcgaaaacgcgcttaaggatgcaaagctggaa
tttaaagacatcaacgaggtgattctcgttggtggctccactcgcattcctgctgttcag
gaggttgtcaagaggctgacggggaaaactcccaacttaagtgtcaacccggatgaagtg
gtcgccttgggagctgcagttcaggctggcattctggctggcgaagtcagcaaggtggtg
ctactggacgtgacctcactgtcgctgggtctggaaactctgggtggtgtcatgacaaag
gtcatccctcgcaacacgacgcgtccggcaaccaagtcggaggttttctccacggccgca
gacaaccagacgagcgtagagatcaatgttctccagggagagcgagagtttgtcaaggac
aataagtccctgggaagcttcaggctggaaggcattcccccagcaccgaggggagtacca
cagatagaggtccgctttgacatcgatgccaatggtattctctcggtgagcgctaccgag
aaaggaactggaaagaagcaggacatcaccatcaccggagctagcactctatctcaggat
gaggtggagagaatggtccaggaggctgagaggtttcgcgcagaggacgaaaagaagagg
ggagacgtggatgccaggaacgaagccgaatctctggtgtatcaaaccgagaagcaggtc
gaggaactgggaggcaaagtcccggctgatgtgaagagcaaggtggaagataaagtgaaa
gcgttgaaagtggagatgtcgagcggtgacactcgcaagatcaaggacgccatagccgca
ttgaggcaggaagcgatgcaaattggccagagcttgtatagccaagctggaacgaaagaa
gcgaaggaaacgaagggaacgaaagaaaccaaagatggtagcgatggtgatgaagtcatt
gacgcggattttagctcgtag
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