Selaginella moellendorffii: SELMODRAFT_117838
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Entry
SELMODRAFT_117838 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_117838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_117838
04147 Exosome [BR:
smo04147
]
SELMODRAFT_117838
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_117838
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_117838
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_117838
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_117838
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_117838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_22
nSTAND1
AAA_15
AAA_7
DUF87
G-alpha
Motif
Other DBs
NCBI-GeneID:
9654767
NCBI-ProteinID:
XP_002983357
JGI:
117838
UniProt:
D8SIX3
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MARISCPGRRHASGGADRAGNSKKSEEEPGGGGDREVVSYWQLLSYADRYDVVLMLVGSV
AAMVSGLIFPAILVVQSHLINNFGSLQNRPVELARRVSEDATFLVYTAAVALVASYLEVS
CWMKTGERQVARIRADYLRAILRQNVGYFDSDMSTAEVVGNVSVDTLLVQEAISEKVGNF
IENLSHFVGGYFVGFTQIWRLALVMLPFFPLLIIPGSLYSKALSEFAIRRQSAYKEAGTI
AEQGLSSVRTVYSFVAEKKTTEKYSAALDGTVKLGLKQGLAKGLAMGSSGINFALWAFMA
WYGSELVMQHRANGGQVLTTGFAVLSGGIALGNATPNMKAFAEGRVAGTRIFKMIQRVPP
IDTNDSSGKTLSKVEGNLDLKEVEFAYPSRPGALVLKSFTLHVPAKKTVALVGSSGSGKS
TIISLIERFYDPVAGQVMLDNVDIRELHLMWLRRQMGLVNQEPGLFATSIRENILYGKEN
ASMEEITHAAKLANAHDFIQRMPRGYDTQVGERGVQLSGGQKQRIAIARALIRNPPILLL
DEATSALDSLSEQAVQQALERARMERTTVIVAHRLSTVQEADLIVVMDSGIAVESGSHEE
LVAEKTGVYASLLMKQANSSGHYEINPATEQVMKVSSATEGDLVDVELSATSEKDINRYT
RLPSRTSRKVKSKPKVKKPSVARLLALNKPEWKQGLLGLWGAVSFGFVHPFYAFLLGSMV
ASYYTTDVEKLHQTVRIHVYAFLGLGVASFIVNIVQHCSFAALGESLTKRVREKLLASML
SFEVGWFDREENSTGALCSRLASDASMVRGLVGDRISLLVQTASATSVSFIVGLITSWKL
AMVIIAIQPLIILCYYVKNICLRGFAQNTAAAQREACKIASEAVSHHRTVTAFSSQERVL
AFFKSKLEVPIRETMKRSHIAGFSLGVAQFILYASWGLDFWYGGLLVKHGESTFGAVLKT
IFILVSTGRVLAEAGTLSPDLAKGVSAVKSVFEILDRKTEIDAEKDSAKCVPVLKGDVEF
YDVYFAYPSRPDLLVLKNFRLRVNAGQTVALVGESGCGKSSAIGLIERFYDPIGGKVTID
GRDIRGLSLKWLRRQIALVSQEPTLFATSIWENIAYGTENASDSEVVEAARAANAHSFIS
ALPDGYSTFAGEKGLQLSGGQKQRIAIARAILKNPAILLLDEATSALDAESEEIVQQALE
TIMASRTTIVVAHRLSTIQNADSIAVVQDGSVVEQGSHEDLLQWQGMEEEGEDENEEATM
AATNTIAKKRKTNKGVYFSLIHRQYFAGRASLQKDS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggatttcttgccccgggcggcgccatgcatccggcggcgccgatcgcgcaggg
aattccaagaaatccgaggaggagccgggcgggggcggcgatagagaggtcgtctcctac
tggcagctcctcagctacgcggatcgctacgatgtggtgctgatgctcgtcggatcggtg
gcggcgatggtgagcggcttgatcttcccggcgattctggtcgtccagagccacctcatc
aacaatttcgggagcctccagaatcgtcccgtggagctggcgaggagagtatctgaggat
gcgacattcttggtatacacagcggctgttgctttggtggcctcgtacctcgaagtaagc
tgctggatgaagactggagaacggcaagtggcaagaatccgtgcagactacttgcgtgcg
attctcaggcaaaatgtggggtattttgacagcgacatgtccacagctgaggttgttgga
aatgtttcagtggacacacttctcgtacaagaagcgattagcgagaaggttgggaacttt
atcgaaaacttatcccacttcgtgggtggatacttcgtcggattcacacagatatggagg
ctagcacttgtgatgctgccgtttttcccgctgttgataattccaggctcactgtacagc
aaggctctgtccgagtttgcgattcgtaggcagagcgcatacaaagaagcaggaacaatt
gctgaacaaggactgtcgtcggtccgaacggtctactcattcgtggcagagaagaagacg
acagagaagtattcggcagccctggatggcacagtgaagcttggactcaaacaaggactt
gccaaaggacttgccatgggttccagtggcatcaacttcgccctgtgggccttcatggcg
tggtatggcagcgagcttgtgatgcaacaccgtgcaaatggtggtcaagttttgacaaca
ggatttgcggtgctttctggtggcatagctttgggaaatgctacgcccaacatgaaagct
tttgcagaaggacgtgtagctggtaccagaattttcaaaatgattcaacgcgttccccct
atcgacacaaatgattcgagtgggaaaacgcttagcaaagttgaaggtaacttggacctc
aaagaggttgagttcgcatatccttcgagaccgggagctctggttttgaaatctttcact
cttcacgttccagccaaaaagacggtcgcgttggttgggagcagtggatctggaaagtcc
accatcatttctctgatagaaaggttctatgatcctgttgctggtcaagttatgcttgac
aacgtggacattcgagaattgcatcttatgtggttgcgaaggcagatgggactggtgaac
caagagccgggattatttgcaacttcgatacgggagaacattttgtatgggaaagaaaac
gcgagcatggaagagattactcacgcagcaaaacttgccaacgcgcacgacttcatacag
agaatgccgagaggctacgacacacaagttggagaacgtggtgttcagctttctggtgga
caaaagcaaagaattgccatagcacgagcattgattcgaaatccgccaattcttttgctg
gatgaagcgactagtgctctagacagtctctcggagcaagcagttcagcaagcactagaa
agggcacgtatggagcggacaacggtcatagtggctcacaggttatcgacagttcaagaa
gctgatctgattgtagttatggattctggtatagcggtcgaatccggcagtcacgaagag
cttgtagctgagaagacgggggtgtacgcttctctactcatgaagcaagcaaacagctcc
gggcattatgaaatcaatcccgcaacagaacaagtcatgaaagtctcatcggcgactgaa
ggggatctcgtcgacgtggaactttcagcaaccagtgagaaggatattaacaggtacaca
agacttccatcaagaaccagcaggaaggtgaagagcaagccaaaagttaagaagccgtcc
gttgccagacttctggcactaaacaagcccgagtggaagcaaggccttctgggactctgg
ggtgcagtgtcttttggattcgtccatccgttttacgcatttcttcttggtagcatggtc
gcaagctactacacgactgacgtagagaagcttcaccaaacagttcgaattcacgtctac
gccttcctcggtctgggagttgcttcgttcattgtgaacattgtgcaacattgcagcttt
gcggcacttggcgagagcttgacaaagagggtacgtgagaagttgctggcttcaatgctc
agttttgaagtcggctggttcgatagagaagaaaactcaactggtgctttgtgctccaga
ctagcttcggatgcaagcatggttcgtggacttgttggtgatcgtatttctctactcgtc
cagacagcaagcgcaacgtcagtgagctttatcgttgggcttataacttcgtggaagctg
gccatggtgataatagcgatacaaccactcatcatcctctgctactacgtgaaaaatata
tgtctgcgaggatttgctcagaatactgcggcagcacagagggaagcctgcaaaattgca
agcgaggcagtatcacatcaccggacagtcacggcattctcgtcacaggagcgggttctg
gcgttttttaagtcgaagctcgaagttccgattcgagagaccatgaagcggtcacatatt
gcggggtttagcctgggagtagctcagtttattctctacgcatcgtgggggctggatttt
tggtatggaggcctgctggtgaagcacggggagagcacgtttggtgcggttttgaagacg
attttcatattggtgagcacgggacgagttttagccgaagcgggaactctcagtcctgat
cttgccaagggggtctcagcggtgaagtccgtgtttgagattttggacaggaagacagag
atagatgcagagaaggactctgccaagtgtgtgccggttctcaaaggtgacgtcgagttc
tacgacgtctacttcgcgtacccatcgaggccggacttgctcgtgctgaaaaacttcagg
ctgcgagtaaatgctggccagactgtagcactggttggcgaaagcggctgcgggaagtcc
tctgccatcggactgatcgagaggttttacgatccgattggtgggaaggttaccatcgat
ggcagggacatccggggattgagtctaaagtggctgagaagacagattgctcttgtgagc
caggagccgacgctgtttgccacaagtatctgggagaacatcgcttacgggaccgagaac
gcgagtgattcggaagtggtggaggcagcacgagcagcaaacgctcacagcttcatcagc
gctttgccggatggctactcgacgttcgcgggcgagaaaggtctccagctctccggcggg
cagaagcaacgcatcgcaatcgcgcgggccatcctcaagaacccggcgatcctcctgctg
gacgaggcaacgagcgctctcgacgccgagtcggaggagatcgtccagcaggctctagag
acgataatggccagccggacgacgatcgtggtggctcacaggctatccacgatccaaaat
gccgactccatagccgtggtccaggacggtagcgttgtggagcaaggctctcacgaggat
ctcctccaatggcaaggtatggaggaggaaggagaagacgagaacgaagaagccaccatg
gccgctactaacaccatagccaagaagaggaagacgaacaagggagtctacttctcattg
attcacaggcaatacttcgctggtcgcgcctctttacaaaaagattcgtag
DBGET
integrated database retrieval system
