Selaginella moellendorffii: SELMODRAFT_119137
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Entry
SELMODRAFT_119137 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K19022
AP-5 complex subunit beta-1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_119137
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
SELMODRAFT_119137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
DUF4788
Motif
Other DBs
NCBI-GeneID:
9644208
NCBI-ProteinID:
XP_002983970
JGI:
119137
UniProt:
D8SKH3
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MADRKISSQDWEQIFQDFRGSSDARGRWLSLYTPAGLVEQALQAVGSKKDFALKLQTLAF
LDENAALLVADDAAALDLLLDTLRSTLQAPSSADGNSSSSSIKEQMMVTVTSTMVSIDAI
GSSPRRLEILVEMLLVFINRPNHSSERHLRATACECLRELEKAYPCLLHSSAGHLLALCQ
SERTHAGQAYTLLLTSVLRNIALYMPLLRSFYAGTYSILFTTVPLIPFSISPFLSSVSSS
SSSPAVLSSSKDFSEECMKEFRRVISFLLEKPSLLTECGVAEFISDVCRTASCLDLQPSL
LKIQFWNLLHSFSPISCHGFLTILARFPDAFEGEESIVYKRLVLFSRELSQPLTVRLLAI
HWLLGVENLVTSRGREGVLPLVAKSLYPEAFDPLSLKAAKLECLARFAVVFDRQQREGSS
ENFVRVMVQEDATDMASKLLKDGLVCLSSYKWLPPSSTETRLLFRTLHRFLVSGYEHSSK
VVAVLEDGEALVDSLLFRSLQDHLVRMARTVRKLVDRILALLDRFLSCEAHHGLGERLLR
TFSEDLVPALPSNSQLPAYFPLMERIAESGKIPPRALIKSLETYLRFKVGKHSGINAANY
WLRGSEVLTICRTLLMHHQSSRVFRRLTELFGYLCLYFPDIEVRDNARFYLRMLISIPGN
RLREILTYGESQTEDSKPQLLHVSSFLGSPSPRVYLGKKASIQVSSFIHLTRETPLLVRS
SWSLVLHDTFQPILEPVTAEDQKPTAAEPGSSLVAITDDEVPGDSDHPTSDNVLRMMDAK
TADTLAILRRHFSGVSESGVKIQVVCRLKVKSLEAATDNVDAQNLAAIYAAVISFSTSGL
YGPIPPVRVPFLLSEPSHKPKSSVTSPTASTTSEGTERRFGKVVTIVLEPQQPVPTLVDC
HIAFTDEDAQTVHGQLDSIPVGIEDLFMKPTVPASVSNEPEYLLSLFNALWYGCSGPGKL
GTEIFLLKDGRQGLGLQGSESVKLLEAQADRVFSAVENYLAGFVVSVSGTSLKEMARYSG
KFDKSCWIEEPSCSRSSSSASSQTEDKSDLLLASEDSAGGGELGCFMVLVFLPPRYHLLL
RMEVSDWSTLIRIRTDYWPSLAHVDEFLESFVIPRTKMDF
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaagatttcttcacaggactgggagcagatatttcaggatttccggggc
tcgagcgatgctcgcgggcgatggctgtcgctctacacgcccgcggggctcgtggagcag
gcattgcaagcggtgggatccaagaaggattttgcgctcaagctccagacgctcgcgttt
ctggatgagaatgcggccctgctcgtggcagacgatgccgcggcgctggatctactgctg
gacacactgcgatccacgctccaggccccatcttccgccgatggaaactcctcctcgtcc
tcgatcaaggagcagatgatggtcactgtgacgtccaccatggtgagcatcgatgcgatc
ggcagctcgccgcgccgcctggagattctggtggagatgctgctcgtctttatcaatcgg
ccaaaccattccagcgagcgccatctccgagccactgcgtgtgagtgtctacgcgagcta
gaaaaggcctatccctgccttctccattccagcgctggccatctactagcgctgtgccag
agcgagcggactcacgctggccaagcgtacacgctccttctcaccagcgttcttcgcaac
atcgccctctacatgcctcttctacgatctttctacgctggtacgtactccatcctcttc
accaccgtgcctttgatcccattctcaatctcgccattcctcagcagtgtttcttctagc
tcctcgtcacccgcagttctttcctcgtccaaggatttctccgaggaatgcatgaaagag
tttcgtagagtgatatctttccttctcgagaagccgagtctcttaaccgagtgtggggtg
gccgagtttatatccgatgtgtgtcgcacagccagctgcttggatttgcaacccagcttg
ctcaagatccagttctggaacctcttgcattctttcagtccgatctcctgccatggcttt
ctcaccatccttgctcgcttccctgatgctttcgaaggagaagagtcgatcgtatacaag
cgtcttgtgttgttctcgagagagctctctcagccgctcactgttcgtctcctggccata
cactggctgctgggcgtcgagaacttggtcacctccagaggcagggaaggtgttcttccg
ctggtggcgaagtcactctatccggaagcttttgatccgctctcgctcaaggccgcaaag
ctggagtgtctcgctcgctttgcagtggttttcgacaggcagcagcgagaaggctcttcc
gagaactttgtccgcgtcatggtccaggaagatgcgacggacatggccagcaagctcttg
aaggacggactggtgtgcttgtcatcttacaagtggcttcctccgagcagcacagagacg
aggctactgttccggacacttcacaggtttttggtttccggatacgagcattcttcaaag
gtggtggcggtgttggaagatggtgaagctctggtggactctttgctcttcaggtctcta
caggatcacctcgtcagaatggctagaactgtgaggaagctcgtggatagaatcctcgct
ctgctggacaggtttctaagctgtgaggctcatcacggcctcggtgagcggctcttgaga
actttcagtgaggatctggtccctgctcttccttcgaattcgcagctcccggcctacttt
ccgttgatggagaggattgcagagagtggcaagattcctcccagagcgctcatcaaatcc
ctcgaaacttatctcaggttcaaggttggcaagcactctgggattaacgctgcgaattac
tggctccgaggaagcgaggttctgaccatctgccgaactctacttatgcatcaccagagc
tcgagagtttttcgccggctgacagagctctttggatatttgtgcctctactttccagac
atcgaggttcgagacaatgcaaggttctacctccggatgctgatatcaatcccaggaaat
cgtctgcgggaaatacttacgtacggagaaagccagacagaagattcaaagccacagctg
ctgcatgtgtcctcgtttctgggatcgccatcgcctcgagtctacctgggaaagaaggcg
tccatacaggtctcgtcctttatccatctcacccgagagactccactgctggtgcgaagc
tcgtggtctctggtgctgcacgatactttccagcccattctggagcctgtcacggcagaa
gatcagaagccgacagcagcagaaccaggtagtagcctcgtcgcaataaccgacgacgaa
gttcctggcgactcggatcatccaacttcggacaatgtgctgcgtatgatggatgcaaag
actgcggatactctcgcaattcttcgaaggcacttctccggggtctcggaatcgggtgtg
aagatccaggtggtttgccggttgaaagtgaagtcactggaagcagcaacagataacgtg
gacgcacaaaacttggctgccatatatgctgcggtcatcagcttctcgacgagtggcttg
tatgggcctataccgccagtccgtgttccattcctcctgagcgagccttcacacaagcca
aagtcttcggtgacgagtccgaccgccagtaccacgtccgaagggaccgaacgaagattt
ggcaaggtggtgacgatcgtgctggagccccagcagccggttccaactttggtcgactgc
cacattgctttcacggacgaggacgctcagaccgttcacgggcaactggacagcattcca
gtcggcatcgaggacctgttcatgaagccgacggtgccggcgagcgtctccaacgagccg
gagtatctcctgagcctgttcaacgcgctgtggtatgggtgtagcggaccagggaagctc
gggacggagatctttctcttgaaggatggaaggcaagggctgggcttgcagggctcggag
tccgtcaagctcctggaagctcaagcggacagagttttctcggccgtggagaactacttg
gctggtttcgtggtgtccgtgagcgggacttctctcaaggagatggcgagatacagtgga
aagtttgacaagagctgctggatcgaggaaccgtcttgctcgaggagctcctcgagcgct
tcttcgcaaaccgaggacaaaagcgatttgctgcttgcgagcgaagactccgccggcgga
ggagagctcggctgcttcatggtgctcgttttccttcctccaaggtaccatttgctcttg
agaatggaggtctcggattggtctaccttgattcgcattagaacagactactggccgagc
ctagctcacgttgacgaattcctcgaatcgttcgttatcccgagaacaaagatggatttc
tag
DBGET
integrated database retrieval system