KEGG   Selaginella moellendorffii: SELMODRAFT_120055
Entry
SELMODRAFT_120055 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
smo  Selaginella moellendorffii
Pathway
smo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SELMODRAFT_120055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smo03041]
    SELMODRAFT_120055
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_120055
Spliceosome [BR:smo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    SELMODRAFT_120055
 Complex B
    SELMODRAFT_120055
 Complex C
   U2 SnRNP specific factors
    SELMODRAFT_120055
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    SELMODRAFT_120055
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT Htt_N-HEAT_1 HEAT_EF3_N HEAT_ECM29 XMAP215_CLASP_TOG Adaptin_N HEAT_2 UME
Other DBs
NCBI-GeneID: 9643914
NCBI-ProteinID: XP_002984275
JGI: 120055
UniProt: D8SLJ9
LinkDB
Position
Unknown
AA seq 1256 aa
MALDDDIERVQEERRQKQQELAALSAVSFDNDLYGDKMEYVNSIATTEEEEDQDGNEREK
QVSASRRQLSSYTAPKSVLAEMPRGEVTDEELGFRKPQPIAAREDDYRKSRFKRALSPDR
NDAFAMGDKTPAPTTRTYAEVMMDEKLKRDKEETLRAIAKKKQEETEKKLSSAAAAAAAA
AKRKNRWDLAKEEEESKKAKISEWDAPDAPTPAPSRWDATPAPGKAASADATPVTPRRNR
WDETPRPGGGVTPGPGVAWDATPSIGGVPGAATPKKQRSRWDETPVGSAPSILGATPLGY
TPGITPMGGADLATPTPGQIALRAATMTPEQYNMYRWERDIEERNRPLSDEDLDAILPTE
GYKVLEAPASYVPIRTPARKLLATPTPMGGTPLYSIPEEDRNQQYDVPKETPEGLPFIKP
EDYQYFSALLQEKEEHEMSPEENKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPLLIDEDYYA
RVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLLFLK
AVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKSLVEIIEHGLNDENQKVKTITALSL
AALAEAAAPYGIESFDSVLKPLWKGIRNHRGKVLAAFLKAIGFIIPLMDAVYANYYTKEV
MVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIKTEILPQYFKFFWVRRMALDRRN
YRQLVDTTVEIANKVGVSDIVSRVVEDLKDESEPYRRMVMETIEKVVSNLGASDIDSRLE
EFLVDGILYAFQEQTSDDANVMLNGFGAVVNAMGQRAKPYLPQICGTIKWRLNNKSAKVR
QQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMSK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGADYVPAREWMRICFELLEMLKA
HKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTA
ASAVKHMALGVAGLGCEDALIHLMNYVWPNIFETSPHVINAVMEAIEAMRVSLGPVIVLS
YCLQGLFHPARKVREVYWKIYNSLYIGSQDGLVAAYPILDDDERNIYSRPELHMFV
NT seq 3771 nt   +upstreamnt  +downstreamnt
atggcattggacgacgacatcgagcgcgtgcaagaggagcggcggcagaagcagcaggag
ctcgccgcgctctcagctgtaagtttcgacaatgatctgtacggggacaagatggagtat
gtgaattccatcgccacgaccgaggaggaggaggatcaggacgggaatgagagggagaaa
caggttagcgcatcgcgtaggcagctcagctcgtacaccgcgcccaaatctgtgctagcg
gagatgccacgcggagaagtgacagacgaggagctggggtttaggaagccgcagcccatc
gcggcgagggaggatgactaccgcaagtcgaggtttaagagagctctctcgccggacagg
aacgatgccttcgccatgggggataagacgccagctcccacgaccaggacttatgccgag
gtgatgatggacgagaagctcaagcgggacaaggaagagactctccgggcaatcgcgaag
aagaagcaagaggagacggagaagaaactgtcgtccgcggctgctgctgctgctgccgct
gccaagcggaagaacagatgggacttagcgaaggaggaggaggagtcaaagaaggccaag
atctcagagtgggacgctcccgatgctccaaccccagctccaagccgctgggacgcgact
cctgctccggggaaagctgcgtccgcggatgcgactcctgtaactccaaggcggaaccgg
tgggacgagacgcctcgacctggcggtggtgtcacgcctggtcctggcgtggcgtgggat
gctacacccagcattggaggcgtaccgggagccgccactcccaagaagcagcgttctcgc
tgggatgagacacctgttggaagtgctccttcaatccttggagctacacctctgggatac
actccggggatcacaccgatgggaggtgccgaccttgcgactcctactccaggacagatt
gctctgcgagcggcaaccatgactccggagcagtacaacatgtatcggtgggagagagac
attgaggagcggaatcgaccgctttcggacgaggacttggacgcaattcttccgaccgag
gggtacaaggtactcgaagctcctgcgtcctacgtgcctattagaactccggcgaggaag
ttgctggcgacaccgacgccaatgggtggcacgcctttgtactctattccggaggaggat
cgcaaccagcagtacgacgtgccgaaggaaaccccggagggcctgccatttatcaagccc
gaggactaccagtacttcagtgctctgctgcaagagaaagaggagcatgagatgtcacct
gaagaaaacaaagagaggaagatcatgaagctcctacttaaggtaaagaacggtactcct
ccgcagaggaagacggctttgaggcagctgacggacaaggctcgggagttcggggctggt
ccactgttcaaccagatcttgccactgctcatgtctcccacacttgaggatcaggagcgc
caccttctggtgaaagtcatcgacagggtcttgtacaaactggacgagctggtcaggccg
ttcgtgcacaagatcctggtggtgattgagccactgctgattgacgaggattattatgct
cgagttgaaggccgagaaataatctcgaatctcagcaaggcggcggggctggctaccatg
atcgctgcaatgaggcccgacattgacaacatcgatgagtacgtaagaaacactacggct
cgagcgttcagtgttgtggcctcggcacttggtatcccagctcttctcttgttcctcaag
gcggtgtgtcagagcaaaaagtcgtggcaagcgcggcacacgggcatcaagatcgtgcag
cagattgcaattctcatggggtgtgcggtactgccgcacctgaagtcactggtggagatc
atcgagcacggtcttaacgacgagaatcagaaggtgaagactattaccgcgctctccttg
gctgctctggccgaggctgccgcgccttacggtatagaaagcttcgactcggttttgaag
cctctctggaagggcatcaggaatcacaggggcaaggttctagctgcgttcttgaaggcc
attgggttcatcattccgctgatggatgcagtctatgcgaactactacaccaaagaagtc
atggtgatcctgatccgggaattccagtctcctgacgaagaaatgaagaagatcgtgtta
aaggtggtgaagcagtgcgtgagcaccgagggtgtggaggcggactacatcaagacagag
atactcccgcagtacttcaagttcttttgggtcaggaggatggcattggaccgcagaaac
tacaggcagctggtcgacacgaccgtggaaattgccaacaaagttggtgtctcggacatc
gtgagcagggtggtggaagatctcaaggacgagagcgagccgtacaggcggatggttatg
gaaacgatcgagaaggtggtgtccaatctgggggcttcggacatcgactcccggctggag
gagtttctggtggacgggatcctgtacgcattccaggagcagacgagcgacgacgcgaac
gtgatgctcaacggtttcggagccgtggtgaacgcgatgggccagcgcgcgaagccatac
ttgcctcagatatgcgggacgatcaagtggcggctcaacaacaagagcgcaaaggtccgg
cagcaggcggcggacttgatctcccggatcgcggtggtgatgaagcagtgcggcgaggag
cagctcatgggacacttaggcgtggtgctgtacgagtacctgggtgaggagtacccggag
gtgctgggctccatattgggcgcgctgaaagccatcgtcaacgtgatcggcatgtcgaag
atgacgcccccgatcaaggacctgctaccgcggctcactcccatcctcaagaacaggcac
gagaaggtccaggagaactgcatcgacctggttggccggatcgcggaccgcggcgccgac
tacgtcccggcgcgcgagtggatgcgcatctgcttcgagctgctggagatgctcaaggcg
cacaagaaggggatccggcgcgcgacggtgaacacgttcggctacatagccaaggcgatc
ggcccgcaggacgtgctggcgacgctgctcaacaatctgaaggtgcaggagcggcagaac
cgggtgtgcacgacggtggcgatcgccatcgtggcggagacgtgctcgcccttcacggtg
ctgccggcgctgatgaacgagtaccgggtgccggagctcaacgtccagaacggcgtgctc
aagtcgctctcgttcctgttcgagtacatcggcgagatggggaaggactacatctacgcg
gtgacgccgctgctcgaggacgcgctcatggacagggacctggtgcacaggcagacggcg
gcgtccgcggtgaagcatatggcgctcggggtggcggggctggggtgcgaggacgcgctc
atccatctcatgaactacgtgtggccgaacatcttcgagacgtcgccgcacgtaatcaac
gcggtgatggaggcgatcgaggcgatgcgggtgtcgctggggccagtgatcgtgctgagc
tactgcctccaggggctgttccatccggcgaggaaggtccgcgaggtgtactggaagatt
tacaactcgctctacatcgggtcgcaggacgggctggttgcggcgtatccgattctcgac
gatgacgagaggaacatctacagccggcccgagcttcatatgtttgtgtga

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