Selaginella moellendorffii: SELMODRAFT_120654
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Entry
SELMODRAFT_120654 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_120654
Spliceosome [BR:
smo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
SELMODRAFT_120654
Other components
Complex C specific factors
SELMODRAFT_120654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
YagK_YfjJ_C
Motif
Other DBs
NCBI-GeneID:
9644760
NCBI-ProteinID:
XP_002984629
JGI:
120654
UniProt:
D8SN16
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MERFSTEGDFVDGEWIDGEFYYRSRRKRRGQTKEEALYGYQSSGSDSDGGGGGRRGRKKR
RGGIIVEDKSSKPVNFVSASVQDVGTENQASAGDDDDGDLELPSALGKKIQEKVRQKTKK
KPGGPASSSSVKYVWQKHTSEFTNKMMSKMGLTGGTGLGKNLQGRVAAIEVKLRPKNMGM
GYNDFQEVTTGRDDPAAATESEEVAHRSRANEQLWMKKNKKKAKTFVSAEELLSRQQGRT
VGKVLDMTGPQVRVVTDMKDLNAERMVVEEDDTPMPELQHNLKLLVDLVASDIQQYDSRL
RHDKQTIAILEKDRDRLQKELELQSRSLEVMHSITSAIEGVQQEAASRRLTLDGLLKTFA
KLKAEFPEEYKLWNLSALALSHAAPRITSHFQAWQPLLQPSRGVDVLLPWMELLQEQEEE
AIFTEVDTAPYSRLVMETVLPHINRAVINWEAREPEPLLRVLEVWEKLLPASVFQSVLDS
CVMPKLRAQVEAWDPLQDTVPVHHWVHPWLPLLGSRMDPVCDTIRWKLNSVLQAWDPSDV
SAYLMLSPWHSVFDAASWEQLLARNIVPKLKVALEQLEINPAQQRLEPFSWVMAWAPVMP
LRLMIRMLEEKFFPKWHHALFAWLGSNPDFDEVTQWYQGWKSVLPAELLANDRVRWQLNG
ALEMMNQAVEGAPLVMRDAEQWQQQFVEKKFAAVAVAVAEAEAEMSLKEVVESFAQEKDV
QFLPKPGRLHQGLQVYGFGSVSIAVDNHKQAVLAQAGQKWTSVSLEQLLEIHHARKGGKW
NS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcttcagcacggagggcgatttcgtggatggcgagtggatcgacggtgagttc
tactaccggagccgccggaagaggcgggggcagaccaaggaggaggcgctctacggctac
cagtcgtcagggtcggattcggatggaggaggaggaggaagaaggggcaggaagaagcgg
cggggcgggataatcgtcgaggacaagtcgagcaagcccgtgaatttcgtgtcggcgagc
gtccaggacgtgggcactgagaatcaggcatctgccggggacgatgacgatggcgatctg
gagctgccgagtgctctgggaaagaagatccaagagaaagtccggcagaagacaaagaag
aaacccggaggcccagcttctagtagctctgttaagtatgtctggcagaagcacaccagc
gaatttaccaacaagatgatgtcgaagatgggattaactggtggtaccggcttgggaaag
aacttgcaaggcagggtggcggcgattgaagtgaagttgaggcccaagaacatggggatg
ggatacaatgactttcaggaggtgacgacgggtcgtgatgatccagcagcagcgacagaa
agcgaagaagtggcccataggtcgagagcaaacgagcagctctggatgaagaagaacaaa
aagaaggcaaaaactttcgtttcagccgaggagctcttgtcacggcagcagggaagaaca
gttggcaaggttttggacatgacggggccacaggtgcgcgttgtcacggacatgaaggac
ctcaacgccgagagaatggttgtcgaggaggacgacactcccatgccagagctccagcac
aacttgaagctcctagtggatctcgttgcttcggacatccagcagtacgactccaggctc
aggcacgacaagcaaaccatcgccatccttgagaaggaccgggaccggctgcagaaggag
ctggagctccagagcaggagcctcgaggtgatgcactcgatcacttccgccatcgaaggt
gtccagcaagaagctgcgtcgcggaggctaactctagacggcctgctcaaaaccttcgcc
aagctcaaggccgagttcccggaggagtacaagctctggaacctttcagctctggcgctg
tctcacgcagcaccgaggatcacctctcacttccaagcatggcagccgctcctccagccg
tcccgaggtgtcgacgttctccttccgtggatggaactcctccaggagcaggaggaggag
gcgatcttcaccgaggtggacactgctccgtatagtcgcctggtgatggaaacggtgctg
ccgcatatcaaccgtgcggtgatcaactgggaagctcgagagccggagccgctcctccgg
gtgctcgaggtgtgggagaagctcctcccagcgtcggtgttccagagcgtgctggacagc
tgcgtgatgcccaagctgcgagctcaggtggaggcgtgggatccattgcaggacacggtc
ccggttcaccactgggtgcatccctggctgccgctcctcggctcgaggatggacccggtg
tgcgataccatccggtggaagctaaacagcgtgctgcaagcctgggatcccagtgacgtc
tcggcgtacttgatgctctcgccgtggcactcggtgtttgatgcggcgagctgggagcag
ctcctggcacggaacatcgtcccgaagctaaaggtggcgctcgagcagctggagatcaac
ccggcacagcagcggctggagcctttctcgtgggtgatggcctgggctccggtgatgccg
cttcgtctcatgatccggatgctggaggagaagttcttcccgaagtggcaccacgcgctg
ttcgcatggctgggatccaacccggacttcgacgaggtgacgcagtggtaccaggggtgg
aagtcggtgctgccggcggagctgctggccaacgatcgcgtaaggtggcagctcaacggg
gcgctggagatgatgaaccaggcggtggagggggcgccgctggtgatgcgcgacgcggag
cagtggcagcagcagtttgtggagaagaagttcgcggcggtggcggtggcggtggcggag
gcggaggcggagatgagcttgaaggaggtggtggagagcttcgcgcaggagaaggacgtc
cagttcttgccaaagccggggcggctgcaccaggggctccaggtttatggatttggatcg
gtgagtatcgcggtggacaatcacaagcaggcagtcttggctcaggctgggcagaagtgg
acgtccgtgtcgctggagcagctgctcgagatccaccatgctcgaaagggtggcaagtgg
aactcttga
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integrated database retrieval system
