Selaginella moellendorffii: SELMODRAFT_120899
Help
Entry
SELMODRAFT_120899 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_120899
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SELMODRAFT_120899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
LicD
Motif
Other DBs
NCBI-GeneID:
9644750
NCBI-ProteinID:
XP_002984721
JGI:
120899
UniProt:
D8SMZ5
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAVITPEERLWSVVKANPADFNAWTELIQETEKHDEIDRIRVCYDTFLAEFPLCYGYWKK
YADFELRLGSPEKIIEVYERAVKAVAHSVDIWVHYCAYAAEKFPPEEVIRLFERGVSLVG
TDYLSHILWDKFIDYALARQDYSLLMQVRTRILEVPLQQLDRYFMSFKQFTNNRHWLDVR
TEEKRHLAETLPRNAHESEKLISAKEAIYKKTKEWDAKIRDFENSIRRPYFHVKSLDDAQ
LANWHKYLDFVEKEADMQKVVKLFERCLIACANYPEYWIRYVEYLEKQKNLEMANDALHR
ATHIFVKKVPDVHIFAARFQERTGDATAARKTYKYISTELVPGHLDAIVKAAHFEMREGD
NDAACGVFESAIEVEKAKEESKTLSLLYVQYNRFLCRVCIVSQTPRAKTSSLCRRLIASP
KLRNEVKQLDKLSSLIQQSTKAETGLAHTDREELSSLHLEFVDAFGDINAVMEAEYRHEG
LFPFRKSYIDFKRRLAHDASFSDRAKLLKSSPAAMQAYGQQQWAAAYGGQSYPQNWQQQQ
APQTAQWNAYAQQAAYSAYGTSQVFSESVS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgatcactccggaggaacggctttggagcgttgtcaaggcgaatccagcggat
tttaatgcgtggacggaacttatccaagaaaccgagaagcatgatgagattgatcgcatt
cgtgtttgctacgatacttttctcgcggagtttcctctttgctatggttactggaagaag
tatgctgactttgagttgcggcttggctcgccggagaagatcatcgaagtttacgagcga
gctgtgaaggctgtggctcattccgtggacatttgggtgcactactgtgcctatgcggcc
gagaagtttccaccggaagaagtcatcaggctgtttgagcgaggagtttctttggttggg
acggactacctgtcgcatatcttgtgggacaaatttatagactacgcattggccaggcaa
gactatagcttgctcatgcaagtgcgcacgcgaattttggaagttcctctgcagcaacta
gaccggtatttcatgagttttaagcagttcacaaacaacagacattggttagatgtgaga
acagaagagaagcggcatttggcggaaacacttcccagaaatgcgcacgagtctgagaag
ctgatatcagcgaaagaggccatttataagaaaacaaaggaatgggatgccaaaatcagg
gacttcgagaactcgatacgcaggccatattttcacgtcaagtctctggacgacgcgcag
cttgcaaactggcacaagtacctggatttcgttgagaaggaagcagacatgcagaaggtt
gtgaagctttttgagaggtgcctaattgcctgtgcaaattatcccgagtactggattcgg
tatgtcgaatatttagaaaagcagaagaatctggaaatggcaaacgatgcattgcaccgg
gcgacccatatatttgtcaagaaagtaccagatgtccatatttttgccgccaggtttcaa
gagcgcaccggtgatgctactgctgctcgtaaaacttataaatacataagcacggagctc
gtcccgggccatcttgacgcgattgtaaaggcggctcattttgaaatgcgtgagggagac
aatgacgctgcttgtggcgtctttgagtctgcaattgaagtagagaaagccaaggaggag
tctaagactctatcattattatatgtccagtataatcgtttcctctgtcgggtatgcatt
gtatctcaaacaccacgagctaaaacgtcctcgttatgtcgcagattgatcgcaagtcca
aagctaaggaacgaagttaaacaactggataaactgtcctctctaatccagcagtcaacc
aaggccgagacaggcttagctcacactgatcgcgaagaactttcaagcttacatctagag
tttgtagacgcatttggagacatcaacgctgtcatggaagcggaataccgtcacgaagga
ctgttcccgttccggaaatcatacattgattttaagaggcgcctggcacacgacgccagc
ttcagcgatcgagccaagctcttaaagagctcccccgcggcaatgcaagcgtacgggcag
caacagtgggccgcggcctacggaggccagagctatcctcaaaactggcagcaacagcaa
gctccacaaacagcacagtggaatgcgtacgctcaacaggcagcttacagtgcctatggc
acgtctcaggtcttttcagagtccgtctcttaa
DBGET
integrated database retrieval system