Selaginella moellendorffii: SELMODRAFT_121488
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Entry
SELMODRAFT_121488 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_121488
03460 Fanconi anemia pathway
SELMODRAFT_121488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_121488
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_121488
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SELMODRAFT_121488
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Topoisomerases
SELMODRAFT_121488
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
SELMODRAFT_121488
FA (Fanconi anemia) pathway
SELMODRAFT_121488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
PepQ_N
YchJ_M-like
Motif
Other DBs
NCBI-GeneID:
9648957
NCBI-ProteinID:
XP_002985109
JGI:
121488
UniProt:
D8SP39
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MAVNVLNVAEKPSAAKEIAQILSHGDCRSLSGHSVYNRIFHFNYMIGGQPCRMVMTSVSG
HLMELDFEEQFRKWYYCDPADLFQAPVRRYVPQDKLGIKRTLEEQARNCQWLVLWLDCDR
EGENIAYEVVEVCLNVNRGLNVLRARFSAFIEREIQHAAQNLHRPNRNLSDAVDARQEID
LRIGASFTRFQTMLLKDRFVLPFDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFW
TINCVYRSENDSASFKWARGHLFDYVAAVAIYEMCVEEPLATVFSVTGRETRKNPPHPLN
TVELVKRASRFLRLGSQETMKAAEELYQQGFISYPRTETDYFSENTDLRRMVEEQTRHPV
WGNYAHRLLDSRENLWRHPSNGGHDDKAHPPIHPTRFSDGEPQWRNDHKAVYELVVRHFL
ACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYRYENWAASTLPNFDLGQQFIP
TRLTLDAGRTQPPPLLSEADLIALMDKEGIGTDATMHDHIKKLLDRRYATKDAQTRFCPT
NLGEALVMGYDTMGYELWKPHLRSIMERDMKAVGDGIKVKENVLETCLQQMKTCFLDVGF
KAFQLLLYFLIFLIFSRLESQNQVPEAVQVGGIVRRCPMCREADMVLKRRPDSKFMVGCR
NFPQCKNVVWLPSVVMEATVTTHTCNSCIPAPVYKIDFKFKRAEIPPQYSIYHTGCVGGC
DIVLNDIMNIYRAPPAPSGSNFAFLARLTETLCRERTSTGSSFWTWPWCCLSKTRPPWWR
CWEIPKPKPAW
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaatgttttgaatgtggcggagaagcccagcgccgccaaggagatcgcgcag
atcttgtcacatggcgattgccggagcttgagcggccattctgtctacaacaggatcttc
catttcaactacatgatcggtggtcagccatgccgaatggtaatgacctctgtcagcggc
catctcatggagctggatttcgaggagcaattccggaaatggtactactgcgatccggcc
gatttgttccaggcgccagtgaggagatacgttccccaggacaagctgggaatcaaacgg
acgctggaagaacaggctaggaattgccagtggcttgttctttggctcgattgcgatcga
gaaggagagaacattgcctacgaagtggtggaggtctgtctcaatgttaaccggggactc
aacgtcttacgagctcgcttctcagcatttatcgagagggaaatccagcacgctgcacag
aatttgcaccggccaaatcgcaatctttcggatgctgtggacgcgcgccaggagatcgat
ctacgtataggtgcttccttcactcgctttcagacaatgctcttgaaagatcgctttgtt
cttccatttgacgagcatgagaaggccattcttagctatggtccgtgccagtttccaact
ctaggctttgtcgttgaaagatattggcaagttcaagcacaccagcctgaagatttttgg
accataaactgcgtgtacaggtcggagaacgacagtgcttccttcaaatgggcgcgtggc
catcttttcgactatgtagccgccgtcgccatatatgaaatgtgcgtggaagagcctctt
gctacggttttctctgttactggacgtgagacacgtaaaaatccaccgcatccactgaat
actgttgagctggtgaagcgcgcttcacggtttctacgccttgggtcccaggagacaatg
aaggctgctgaagagctctaccagcaaggattcatcagctatccccggactgagacagat
tacttttcggagaatactgatcttcgacgcatggtagaggagcagaccaggcatcctgtg
tggggaaattatgcccatcgccttcttgactctcgagagaatttgtggagacatccgagc
aatggtggacacgacgataaagctcatccgcctatacatcctaccaggttttcggatgga
gaaccacaatggaggaacgatcacaaggcagtatatgagcttgttgtgcgacactttctt
gcgtgtgtctcgcagccggctgtaggatacgcaacaaaagccatgattgacattgctggg
gaacagttctctgctaatggactcatggtgactgctagaaattacttggaagtttataga
tacgaaaactgggctgcttcaactcttccaaactttgaccttggacaacagttcattcca
accaggcttacgctggatgctggcagaacgcaacccccaccccttttgtcagaagcggat
ttaatcgcgctcatggacaaggagggaattggaacggatgctactatgcatgatcacata
aaaaagctgctggaccggcgctacgctaccaaagatgcgcagacacgcttttgtcccaca
aacttgggcgaggcactggttatgggatatgacacgatggggtacgagctttggaagccc
catctcagatctataatggagagagacatgaaggccgtgggcgacggaataaaggtgaag
gagaatgtcctggagacatgcctgcagcaaatgaagacgtgctttctcgatgtaggtttt
aaagcttttcagctgctgctttattttcttatttttcttattttttccaggctagaaagc
caaaatcaagtccctgaagcggtgcaagtcggtggaatcgttcgaaggtgcccaatgtgt
cgtgaagcggacatggttttaaagagaagaccagatagcaagtttatggttggttgtcgc
aactttccacagtgtaaaaatgtcgtgtggctaccctccgtcgtcatggaagcgacagtc
actacacacacttgcaactcgtgcattccagctccagtttacaaaattgacttcaagttc
aagagagcagagataccaccacaatacagcatttatcacacaggttgcgtgggtggctgt
gacattgtgctgaatgacattatgaatatctatagagcacctcctgctccctcaggttcg
aactttgctttccttgctcggctaacagaaactctatgcagggagaggacaagcacagga
tcgagcttctggacgtggccgtggtgttgcttatccaagacgaggccgccgtggtggcgg
tgctgggagatcccaaaacccaagccggcatggtga
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integrated database retrieval system
