Selaginella moellendorffii: SELMODRAFT_121896
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Entry
SELMODRAFT_121896 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
smo
Selaginella moellendorffii
Pathway
smo03430
Mismatch repair
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SELMODRAFT_121896
03460 Fanconi anemia pathway
SELMODRAFT_121896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_121896
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
SELMODRAFT_121896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
9649500
NCBI-ProteinID:
XP_002985153
JGI:
121896
UniProt:
D8SPD6
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MASCPARSAPIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGD
AIEVSDNGSGVSSDNYQVFFLSLDLFGLTLKYHTSKLSDFSDLQSLTSFGFRGEALSSLC
SLADVSILTRTKEDETGTRISYNRAGLIVSKETAARQVGTTVTVSKLFSPLPVRHKEFLR
NVRREYSRMIAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGSVRENIVTIFGPKTM
ACLDPMDISLPEDLSIEGFVSKPGSGSGRGSSDRQFFFVNGRPVDLPKFSKLLNELYKSF
NSQQYPMAVLNFRLPTTAYDVNVTPDKRKLFLHSESSFMDGLRNALGNLYAPSKYTYAVH
EVEEQKSYMADLQTQVDIEAGVEEVEASEEEQNEDEDDEAEPEASKPLDFFAFSHEDVSI
KTSVRPARVALADKKCSVQGKLTGFVSQKRRTEDSKELLSEEPVLKRRATTMELKTPPNA
FPKEKNFETARQADHSSNPQNGSATDGEALGEECGGLLSEAPLLKKCAKIIGQFNLGFII
ARLDSDLFIIDQHASDEKYNFERLSKSTVLNRQPLLRPMPLHLSSAEEIIISTHMEVFRQ
NGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGSSSSHLVQPSRVR
SMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPWNCPHGRPTMRHLYDLNAKKKALL
SP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtgcccggcaagatcagcgccaatccatcccatcgacaaggcatcgattcac
aggatctgctccggccaggtgattctagatcttgccaccgccgtcaaggagctcgtcgag
aacagcctcgatgctggcgccaccagcattgaagtcaagctcaaggagcacggaggggat
gcgattgaggtctcggacaatgggtctggcgtctcctccgataactatcaggtcttcttt
ctttctctcgatctctttggacttacgctcaagtatcacacgtcgaaactctcagatttt
tccgacttgcagtctttgacgtcgtttggatttcgcggggaggctttaagctccctctgc
tcgctggccgacgtaagtattcttacaaggaccaaagaggacgaaacgggaactcgtata
tcttacaaccgcgctggtctcatcgtttctaaagagactgccgctcgccaagtcgggact
actgtgaccgtctcaaagctgttcagtccgctccccgtgcggcacaaggagtttttgcga
aacgtgaggcgggagtacagccgcatgatcgccattttgcaagcttatgcactgatttcc
aaaaatgttcgcctggtgtgcacgaacttggttggcaaaagcagtcgctccacgattcta
cgcacacagggtggctctgtcagggaaaacatcgtcaccatctttggtcccaagacgatg
gcgtgcttggatcctatggacatcagcttgcccgaggacttaagcatcgaaggcttcgtt
tcgaagccggggtccggctctggcagaggatcgagcgaccgccagtttttcttcgtcaat
ggacgaccggtggacttgccaaagtttagcaagctgctaaacgagctctataaatctttc
aactcacagcagtacccgatggctgtgctcaactttcggcttccaacaacggcgtatgac
gtgaatgtaactccggacaaacgcaagctcttccttcactcggaaagctcgttcatggac
ggtctcaggaacgctcttggtaacttatacgctcccagcaagtacacgtacgcggtccat
gaggtggaggagcagaagtcctatatggcggacttgcaaactcaggtagatatcgaggct
ggagttgaagaagttgaagctagtgaagaagaacagaatgaagatgaagatgacgaagcg
gagccagaagcttcgaagcctctggactttttcgctttttctcatgaggatgtgagcatc
aaaacatctgtgaggccggccagggtggcacttgcggacaagaaatgttccgtccagggg
aagctgactggatttgtttcgcaaaagagaagaactgaagactccaaagagctgcttagt
gaagaaccagtgctcaagagacgcgcaacgacgatggaactcaaaactcctccaaatgct
tttccgaaggagaaaaacttcgagaccgctagacaggctgatcactcgtcgaatccacag
aatggatcggcgacagatggtgaggctcttggtgaagaatgtggaggccttctaagtgaa
gcgccattgctgaagaagtgtgcaaagataattggtcagttcaaccttggatttattatt
gcgaggctggactctgatttgtttattatcgatcagcatgcgtcggacgaaaagtataac
tttgagcgtttgtccaagtccacagtcttaaaccggcaacctcttctcaggccaatgccg
ctacatttatcttcagcggaggaaatcatcatctcgacacacatggaagtattcaggcaa
aatggcttcgattttactgagcaagaggacgcgcctcccgggcaaaggattctcttgtct
gccgttccattcagcaaaaatgttacctttggcgtctcagatgtccaagagctagtgtcg
ctcttatcggaagattatgggagcagctcctcccatctcgtccagccatcgcgggtgcgc
tcaatgctggcttcacgcgcctgccggtcgtcgattatgatcggcgatgccttgagtaag
aaagaaatggaaaaggttgtgaggcatctcgcagacttggacgcgccttggaactgtccg
catggacgtcccaccatgcggcatctgtatgatctaaacgccaagaaaaaggctttgctg
tcaccgtga
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