KEGG   Selaginella moellendorffii: SELMODRAFT_122696
Entry
SELMODRAFT_122696 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_122696
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    SELMODRAFT_122696
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SCAP WDR54 VPS8_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 9640122
NCBI-ProteinID: XP_002985676
JGI: 122696
UniProt: D8SQZ5
LinkDB
Position
Unknown
AA seq 479 aa
VIACSNLDAGVTVWDLASGVPLSHLRSCAAPRNALACVGHHFLAASQIHKTANNAGGAIF
FWTWHKNQVAFKSYPVEPIEPLACTADGVYLAGGGSSGRIYLWEVSSGRLLRVWAGHYKA
VKCLVFSDDDSLLISGAEDGLVNVYPLVRALDSIEEAGETQVPYMHKWSDHTLPVTGLLA
GSGGSSAIIVSCSLDHTCKIWSLALGALLRSILFPTPINAVALDPGEYALYAGGVDGRIF
ITALNFGVPSGSGLHSADGLLGADGIGHRFRAITALAFSMDGVSLVSGSEDCTVRLWDTV
SRQVLRTFSHSKGDRPNSLLVIPRPSSLLSSTDQQGRQINRRLPTLPVVPLSKYVTVESV
AQDFKPWEGPPVVLPLTYPADDEDAEGYSHSMVAMGRQIRELEQQGSTAAMQMELERLRS
ELRRALNNGQQWQQLHQELYCFCVDELMGGNRDREDDDGENKERTKGRASKVGDKMRDK
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgatcgcctgctccaatctggatgctggcgtgacggtgtgggatttggcgtcgggcgtg
ccgctgtcgcacctccgatcgtgcgcggcgccgcgcaatgccttggcgtgtgttggacat
catttcctggcggcatcgcagatccacaagactgctaacaatgccggcggcgcgatcttc
ttctggacctggcacaagaaccaagtggctttcaagagctatcccgtggagccgatcgag
cccctagcttgcactgccgatggagtttacttggcgggaggaggatcgtcgggaagaatt
tatctctgggaggtctcgagtggaagattgctgcgagtgtgggccgggcactacaaagcc
gtcaagtgtctcgtcttctccgacgatgattcgctactcatctctggtgccgaggatgga
cttgtcaatgtctatcctctcgtgagggccctggacagcatcgaagaagccggggagacc
caggtaccttacatgcacaaatggtcggatcacacacttccagtcactggattgctggcc
ggctctggtggttctagcgcgatcatcgtctcgtgctcactagaccacacctgcaagata
tggagcttggctctcggagctctactccggtcgatactcttccccactcccatcaatgct
gttgcacttgatccaggggagtacgcgctctacgccggtggagtcgatggcaggattttt
atcacggctctaaacttcggtgttccatcggggtctggcttgcattccgcggatgggcta
ctcggtgctgacgggatcggccacaggttccgtgctattactgctctagcatttagcatg
gatggggtgtcgctcgtctctggctccgaggactgcactgtccggttgtgggacaccgtg
agccgccaggttcttcggacgttttctcacagcaaaggtgaccgaccaaacagccttttg
gtgataccacggccctcgtccctgctcagctctacagatcagcaaggccgtcaaatcaac
cgtcgcttaccaacgcttccagtggttccgttgagcaagtacgtaacagtcgagtcagtg
gcacaagacttcaagccttgggaaggccccccggttgtccttccgttaacttatcctgct
gatgacgaggatgccgagggttactctcacagtatggtcgccatgggaagacaaataaga
gaactagagcaacaaggctccacggcagcgatgcaaatggagctggagagattgcgatcg
gagctccggcgggctctaaacaatggccagcagtggcagcaattgcaccaagaactttac
tgtttctgcgtggacgaattgatgggtgggaaccgggacagggaagacgacgacggagag
aacaaggaaagaaccaagggaagagccagcaaggtgggggacaagatgcgtgacaagtaa

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