Selaginella moellendorffii: SELMODRAFT_123057
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Entry
SELMODRAFT_123057 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_123057
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smo04812
]
SELMODRAFT_123057
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
SELMODRAFT_123057
Cytoskeleton proteins [BR:
smo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
SELMODRAFT_123057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
Cnd1
TOR1L1_N
Vac14_Fab1_bd
MMS19_C
HEAT_2
Adaptin_N
UTP20
INTS1_R4
DUF4042
Tti2
DUF3223
Dopey_N
Motif
Other DBs
NCBI-GeneID:
9640528
NCBI-ProteinID:
XP_002985873
JGI:
123057
UniProt:
D8SRH1
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
ATDFQSFPSLLKQLTPPLNVQLSDRRSSIVKQACHLLNILSRELLSDFEACAESFIPMLF
KLVVITVQVIAESADNCIKTILRNCRVSRMLPRIVDIAKNDRSGVLRARCCEYALLILEQ
WPDTPEIQRSAELYEDLIKCCVVDAMSEVRSTARSCYRLFAKTWPERSQKLFFSFDPAIQ
RLINDEERGFHKRYSSPASRTRGNPLRASLTVVSKSTPVTPQTVPIIAMDRRASFSSGGA
HSRTSEQERSLESILQASQQRVNAIETMLRGVDISDVKGPLSKATAKASPKAVDLPSSRD
PPFPASASSAVGGSTTVSSAYTGDLYGTAPGALLSPQRMLSDTKRGMVYNGLSQDSDRVN
ARVSVMDRFNWSSSSLMTESREGKRTPRGDNQGGVPGFQRPLLRNSSSGRSPSATRSHGD
TMQGSYEAFSSNGSTIQLHEVLGEGLSPNADWSARVGAFTFIRDLLQNGIKGLQEITQSF
EKIMKLFFAHLDDPHHKVAQAALTTLNELVPVCRKPFESYLERILPHVFSRLVDPKEIIR
QLSASVLETVGTTYTIESLLPALLRSLDEQRSLKAKVAIIEFANNALSKLTLSGEIPGGS
GLMRLWLAKIAPLVNDKNPKLKDIAVNSLIAVYTHYDSGAVLNFILNLSIEEQASLRRAL
KQYTPRIEVDLVAVLQSKHQRGKKSGNDQNDYSTMSVDGGGRAYSTLMRSQPPGSYSSGS
INSDSGRKWSSMQADSVQYNARMNGQSKENDASAISSNNFRSVSSIEDVSQFKKAGLRSS
GDKLDRMSQTRRLSTEDLRNMVDSIEHNKTDETSLEKRQQKNEADEAYKQFFSQESSKVP
LAEEVKPSEANGSSFDDLPSIPSLLIQMSNVEDSSKRSGALEDFLAIFRKADASSWSQYF
NQILTAVLEALDDPNNAIRELALSVIFEMLNNQRAMMEEPTELLVEKLLHASKDQTPKVA
AGADACLTVVLKEFDAYRCLSVVVPLLVNEDVRTLITCISCLTKLVSRLPQQELMEQLPS
FLPALFDAFGNQNADVRKTVVFCLVDIYIALGKAFVPYLSSLSSNQLRLVTIYANRIAQV
YSNAFVSSRRGI
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gctactgatttccagtctttcccttccttgctgaagcaattaactccccctctaaatgtc
cagctttctgatcggcgctctagtatcgtcaagcaggcttgccatctcttgaatattttg
tctagagaattattatctgatttcgaggcatgcgcagagtccttcatacctatgctattt
aagctcgttgttattactgttcaagttattgccgagtcagccgataattgtataaaaacg
attctgcgtaattgtcgagtttcgcgaatgcttccgcgaattgttgatattgcaaaaaat
gaccgcagtggtgtcttgagagcaagatgttgtgaatacgctcttttgatactagaacag
tggccggatactccagaaatccaacgttcagccgaactttatgaagatcttatcaaatgc
tgtgttgtagatgctatgagcgaggtacgctcaacggcaagatcatgttatcgacttttt
gctaagacgtggcctgaacgatcccaaaaacttttcttctcttttgatccggctattcag
cgtcttataaacgacgaagaaagaggatttcataaacgatactcgtctccagcatcgcgc
accaggggtaacccgttgagggcctcattgactgtcgtctcaaagtcaacccctgttact
ccccagacagttcctattatcgcaatggacagacgtgcgagtttctcgtcgggtggagct
cattcgagaacgagcgagcaagagagaagcttagaaagcattttacaagcaagccaacag
cgggtaaacgcaatagagacgatgctgaggggcgttgatatatctgacgtgaaaggtcct
ctatctaaggctaccgccaaagcaagccccaaggctgtggatttaccatcctctcgtgat
ccaccttttccggcttcagcgtcgtctgccgtgggaggcagtactacagtttctagcgct
tacactggcgatctctacggtactgcacctggagctttgttatctcctcaacgcatgctt
tctgacacgaaaagaggcatggtctacaacggtttgagtcaagacagtgatcgggttaat
gcgagggtatcagtcatggacagattcaactggagcagctctagcttgatgactgaaagc
agggaaggtaagcggactccaaggggtgataaccaaggtggagttccaggattccagaga
ccacttcttagaaacagcagctcggggaggtcgccgtctgccactagaagccatggtgat
actatgcaggggtcctacgaagcgtttagcagtaacgggtccacaatacaactccacgaa
gttcttggagaaggccttagtcccaatgccgactggtcggcacgggttggcgcttttact
ttcatcagggatctgcttcagaacggcataaagggactacaggaaataacgcagagcttt
gagaagattatgaagctcttctttgcacacttggacgatccacatcacaaagttgcgcag
gcagctctgacaaccttgaatgagctcgttccagtttgcagaaaaccgtttgagtcgtac
ttggagcgcattttacctcacgtcttctccagattggtcgacccgaaggaaatcatacgg
cagctcagtgcatcagttcttgagacggttggcacgacttacaccattgagtcgttgctc
cctgctttgttgcgatccctcgacgagcagcggtcacttaaggccaaagtcgctatcatc
gaatttgccaacaatgcactcagtaagctcacgctctcaggggaaataccaggtggtagt
ggactgatgaggttgtggctggcaaagattgctcctctagtgaacgataaaaacccgaag
cttaaggatattgctgtcaacagtcttatagcagtttatactcactacgattccggcgca
gtcctgaacttcattctcaacttatccatcgaagagcaagccagcttacgtcgtgcattg
aaacagtacactcctcgcatagaagtggacctcgtcgcagttctgcaaagcaagcatcaa
cgagggaagaagtcaggcaatgatcaaaatgactactctaccatgtccgtcgatggtgga
ggtcgagcctactcgaccttgatgagaagccagccgcctggaagctattcttccggatcc
ataaacagcgactctggtagaaagtggagctccatgcaggccgactcagtgcagtataac
gccagaatgaacggtcagtccaaagaaaatgatgcgagcgccatcagctcaaacaacttc
aggagcgtgtcgagtatcgaggacgtttcccagtttaagaaggccggattgcgaagttct
ggagataagctcgatagaatgtcccaaacacgcagactgagcaccgaggacctgaggaat
atggtcgacagtattgaacataataagactgacgagactagtttggaaaagcgtcaacag
aaaaatgaggcagacgaagcatacaaacagttcttttctcaggagtctagcaaggtacct
ctagcggaagaagtcaagccttcggaggcaaacggatcaagtttcgacgatcttccgagt
attccatcgctgcttatacagatgtctaatgtggaggattcaagtaaacgatcaggcgct
ctcgaagattttctcgcgatatttcgtaaagccgatgctagcagctggtcacagtatttt
aaccagatcctcacggctgttctcgaagcacttgatgatccgaataatgccattcgcgag
cttgctttatccgttatcttcgaaatgctaaataatcagagagcgatgatggaagaacca
acagagctgctggtagagaaacttctgcatgcaagcaaagaccagacgccaaaggttgct
gctggggcagacgcgtgcctgaccgttgtacttaaagaattcgatgcctatcgctgcctc
tcggttgttgttcctcttctcgtgaacgaagacgtgagaaccttgattacttgtataagc
tgcctaactaagcttgtatcccgtcttccacaacaagagctcatggagcagctaccgtct
ttcctcccggctctcttcgacgcgtttggcaaccaaaacgccgacgttcgcaagactgtt
gtcttttgcttggtggacatctacatcgcactcggaaaagcattcgtcccgtatctgagc
agcctcagcagcaaccagttacggctggtcacgatttacgcgaacagaatcgcacaggta
tactcaaacgcgtttgtttcatcacgtcgtggaatctaa
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