Selaginella moellendorffii: SELMODRAFT_123370
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Entry
SELMODRAFT_123370 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_123370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_123370
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_123370
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
SELMODRAFT_123370
Translation factors [BR:
smo03012
]
Eukaryotic type
Release factors
SELMODRAFT_123370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
DUF3023
Gtr1_RagA
Tub
Peptidase_M35
Motif
Other DBs
NCBI-GeneID:
9639769
NCBI-ProteinID:
XP_002986027
JGI:
123370
UniProt:
D8SRU0
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MDAEPAPSKEDFPEDVTDTRSHLNVVFIGHVDAGKSTIGGQILFVSGMVDERTIQKYERE
AKEKNRESWYMAYIMDTNEEERAKGKTVEVGRASFETAKTRFTILDAPGHKNYVPNMISG
ASQADIGVLVISARKGEFETGFERGGQTREHAQLAKTLGVAKLLVVVNKMDDSSVGWEKE
RFDEIEKKMTPFLKSCGYNIKKDVQFLPISGLYGTNLKERMPTSVCSWWEGPCLFEALDS
VEPPQRDATGPFRMPIIDRYKDMGTVVMGKIEAGSVRRGDNLVVMPNKAPVKVITIFRDA
DEVNQAKPGENLRIRLSGLEEDDISSGFVLSSSSSPIPAVLEFDAQLQVLELLDHKAIFT
AGYKAVLHIHAVVEECEIMELMQQIDPKTKKPMKKKVLFVKSGAVVVVRIQVPAPICIEK
FQDFPQMGRFTLRDEGACLSTSVTMLLLRFGVVLPIPGKTVAIGKVIKLRQE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggaaccagcaccaagcaaggaagattttcccgaagatgttactgacactcga
tcgcacttgaatgttgtgttcattggtcacgttgatgctggcaagtccacaatcggtgga
cagattctttttgtgagtggtatggtggacgaacgcaccatacagaaatacgagcgggaa
gccaaggagaagaatcgcgagagctggtacatggcctacattatggatactaacgaagaa
gagcgtgcgaagggaaagacggtggaagttggcagggcttccttcgaaacggctaaaacg
aggttcacgattctggatgctcccgggcacaaaaactatgtgccaaatatgatcagtggt
gcttcacaagcggacattggcgtgctggttatatccgctcgcaaaggtgaatttgaaacg
ggattcgaaagaggaggccagacacgggagcacgctcaacttgcgaagacactcggtgta
gcgaagctcttggttgttgtaaacaagatggacgattcttccgttgggtgggagaaggaa
aggtttgacgagattgagaagaagatgactccatttctgaagtcctgtggttataacatc
aagaaagatgtccaattccttccaatctcggggctttatggaacaaacctcaaagaaaga
atgccgacgtctgtatgctcttggtgggaaggaccttgtctgtttgaggcattagacagc
gtggagccgcctcaaagggacgctactggtccgttcaggatgccgatcatcgacagatac
aaggacatgggcacggtggtcatgggaaagatagaagcgggatccgtgaggcggggcgat
aatttagtggtcatgcccaacaaggctccagtgaaggttatcaccatcttccgtgacgct
gatgaagtcaatcaagccaaacccggagaaaatctaagaatacggctgtctggtcttgag
gaggatgacatttcatctggttttgtgctctccagcagcagcagcccaatccccgctgtg
ctggagttcgatgctcagcttcaagtgttggaacttctcgatcacaaggctatattcacg
gctggatataaggctgttctccacatccacgcggtcgtggaagaatgtgagatcatggag
ctcatgcaacagattgacccaaaaaccaagaagccaatgaagaaaaaagtgctctttgtc
aagagtggcgccgttgtcgttgtcaggattcaggttcctgctccaatctgcattgagaag
tttcaggactttccacagatgggccgtttcactttgcgtgacgaaggtgcttgtctctca
acttctgttactatgctactactgagatttggtgttgtgcttcccattccaggcaagact
gtcgccattggcaaggtcattaagctgaggcaggaatga
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