Selaginella moellendorffii: SELMODRAFT_123861
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Entry
SELMODRAFT_123861 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_123861
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_123861
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Helicases
SELMODRAFT_123861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
9649403
NCBI-ProteinID:
XP_002986385
JGI:
123861
UniProt:
D8SSL0
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MEVVTKIEFAALEPKLSPETLRVLEQQLGFSRATPVQVATIPLLCSFKDVAVDAATGSGK
TLAFVVPVVEILRRLATPLRRNEVGAMIISPTRELASQIFGVAQKFVKTLENLTALLLVG
GTDVTADLERVKEQGGNVLIGTPGRLHDIMERSTALEFRHLEARTSDLSSLDTITSLFIV
SFQILILDEADRLLDMGFQRQVSAIIELLPKQRRTGLFSATQTQAVEELSKAGLRNPVRV
EVRSEVKGASTTFKTPAGLNIEYLECEGEEKSSQLVNFLRENASRKTIVYFMTCASVDYW
GTVLPRLKTLKDVPIVVLHGKMKQSVRVKALEKFTAMPAGVLFCTDVAARGLDIPGVDWI
VQYDPPQDPNVFVHRVGRTARMGRAGDALVFLLPKEDAYAEFLRIRNVPIEKREKTEVPD
IIPKLRAAAMKDRDVMEKGLKAFVSYFRAYKEHHCTFIFQWKQLELGKVAMSFGLLQLPS
MPELKRGVLTSQHFTPVENIDVDSIPYREKAREKQRRKNLEKKPDTSRREERKALAPSKH
QKDRPAKRTKKRSHRDREELEEINSDYRLLKKLKKGSISEKAYSKLMSLEGDV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtgacgaagatcgaattcgcggcgctggagccaaagctttcgccggagacg
ctccgggtgttagagcagcagcttggattctcgcgcgcgacgccagtccaggtcgcgacg
atccccctgctgtgcagcttcaaggatgtggccgtggatgccgctactggatccgggaaa
acgctcgcgttcgtggttcctgtcgtggagattctccgccgcctcgcgacgccgttgagg
aggaatgaggtgggagcgatgataatctctccaacgagggaattggcttctcagattttc
ggtgtcgctcaaaagtttgtgaaaacgttggaaaatctcacggcattgctgctcgtgggt
ggaaccgatgtcacagctgatctggagagagtgaaagagcaaggcgggaatgtgctcatt
ggaacaccgggacgacttcatgatatcatggagcgatcgacagctttggagtttcggcat
ctcgaggcaagaacttctgatctaagttctcttgacacgataacatctcttttcattgtt
tctttccagattttgatcctcgatgaggctgacaggcttcttgacatgggctttcagcgg
caagtatcagccatcatagaactcttgccaaagcaacgacgaacgggacttttctcggca
acacagacgcaggcagtggaggagctttcaaaggccgggttgagaaatcctgtaagagtg
gaggttcgcagtgaagtgaaaggagcgtcgactacctttaagacgcctgccggtttgaat
attgagtacctggaatgtgaaggtgaggagaaatcttcgcagcttgtcaacttcttgcga
gagaatgcctccaggaaaactattgtatatttcatgacctgtgcttctgtcgattactgg
ggcactgtccttcctcggctcaagactctcaaggatgtaccgatagttgtactgcatggg
aaaatgaaacaaagtgtcagagtaaaggctctagaaaaattcaccgctatgcctgcggga
gtgctgttttgtacagatgtggctgctcgtggactggacatacctggggtggattggatc
gtgcagtatgatcctccccaagacccaaacgttttcgttcatagggtcggccgaactgcc
agaatgggaagagcgggagatgctttagtttttcttcttccaaaggaagacgcttacgca
gagttccttcgtataagaaacgtcccgatagaaaagagagagaaaactgaagtgcctgat
attatacccaagttacgggccgctgctatgaaggatagggacgtgatggagaaaggactc
aaggcatttgtgtcctacttccgagcgtacaaagagcaccactgcacttttatcttccaa
tggaagcaactggaacttggaaaggtcgccatgagcttcggtctattgcaactcccttcc
atgccagaactaaagcgtggtgtgctcacgtcgcagcattttactcctgtggagaacatt
gacgtcgattccattccataccgggagaaagctcgggagaagcaaaggagaaaaaacctc
gagaagaaaccagatacgtcgaggagagaagaaagaaaagctctggcgccatcgaagcac
caaaaggatcgtcccgcgaagagaacaaagaagcgctcgcacagagatagagaagaactg
gaagagattaacagtgactacaggctcttgaaaaaattgaagaagggatccatctccgag
aaagcatactcgaagctgatgagcttggaaggcgatgtatga
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