Selaginella moellendorffii: SELMODRAFT_123915
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Entry
SELMODRAFT_123915 CDS
T01496
Symbol
PGP4B-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_123915 (PGP4B-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_123915 (PGP4B-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_123915 (PGP4B-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_123915 (PGP4B-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_123915 (PGP4B-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_123915 (PGP4B-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_123915 (PGP4B-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_123915 (PGP4B-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_29
AAA_16
RsgA_GTPase
AAA_21
AAA_15
AAA_30
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
9649234
NCBI-ProteinID:
XP_002986365
JGI:
123915
UniProt:
D8SSI0
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MVEKDVAGSNAAAAAVQDDQSATQVVPIFKLFSFADWMDVLLMVLGTVGAVANGMTMPLM
AIVFGELTDSFGQNVSDVDRLSREVSKVSLRFVYLGIVASIGSLFQLACWMCTGERQAAR
IRNLYLKAILRQDISFFDKETKTGEVIGRMSGDTILIQDAMGEKVSKLIQFTTAFFGGFV
IAFIKGWKLTLVMMSVMPLLVFAGGMMANLMSKMASRGQKAYAEAAVVVEQVTGGIRTVA
SFTGERKSMADYETALTKAYKAGVFEGVASGAGLGFTLFTMFSSYGLALWYGSKLVLNGG
YSGGDVISVLFAVLTGGMSLGQTSPSITAIASGRAAAYKMFEVIRRVPLIDAFDMSGQTL
ESVKGDIELRDVTFSYPTRPDVPVFTSFNLEIPSGTTVALVGESGSGKSTVISLIERFYD
PQAGEVLIDGVDIRKLQPKWLRQQIGLVSQEPVLFATSIRENIAYGREGATEEEIMEAAR
LANAAKFISKMPKGFDTQVGEHGTQLSGGQKQRVAIARAILKNPRILLLDEATSALDAES
ERVVQEALDRIMVNRTTVIVAHRLSTIKNADCIAVVQRGSIVEKGTHSELIQRPDGAYEQ
LVRLQEMHEVKSNQSLSAAQAIDPDEVVVIDQELDERRLSRSSSRGSFGSKRNVTRSSFS
LTRTASVDPEQADKSDGKTGVTRNNFLRLAAMNKPETPVFIVGALASTANGVVFPVFGLL
LSNIFGVLYSTNRHKLRHDANFWASMFLVQASACLIISPIQLSAFGFIGQRLIRRVRKRS
FESVVRQEIAWFDDPSNSSGAISSRLSVDAAHVKSMVGDSLSLLLQNLASLIAGLVIAFT
ANWILSLVVLALIPLLGAQGVVQTKMMIGFSKDAKVMYEEATKIANDAVSSIRTVSSYCL
EAKMLELYKTKCSIPTRNGIRNGVVSGIGLGLSSFVMFAAYAFSFWFGARLVREGKTSFQ
NVFKVFFAITMSAFGIAQGVSLAPDFAKVKAGVNSIFATLDRKSKIDPSNEEGKTLESTR
GDIEFRNVRFRYPARHEAEIFRNLSFSIPAGKTMALVGESGSGKSTVISLLERFYDPDSG
SILIDGVDIRSLKLRWLRQNIALVSQEPTLFSGSIRSNIAYGKESGAPVSEEEITAAAKA
ANAHSFISAMPGGYETEVGERGIQLSGGQKQRIAIARAVLKEPKILLLDEATSALDAESE
RLVQEALDRIMVGKTSVVVAHRLSTIVGVDMIAVVKNGGIVEQGSHEELITKPNGAYATL
VKLHRHKPAS
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaaggatgtcgctggatcgaacgcagcagcagcagcagtgcaagatgatcag
tccgcgactcaagttgtccccattttcaagctcttcagcttcgcggattggatggatgtc
ctcctcatggtgctgggaactgtcggcgctgtggcaaacggaatgacgatgccgctcatg
gcgattgtcttcggcgagctgacggattcgtttgggcagaacgtgagcgatgtggatcgc
ctctccagggaagtctccaaggtgtcgttaaggtttgtgtatctcgggatcgtggcttct
attggatctttgtttcaacttgcgtgctggatgtgcaccggagagagacaagccgcgagg
attcgaaacttgtatctcaaagccattctgcgacaagacatctccttttttgacaaagaa
accaagacgggagaagtgatcggtcgaatgtccggagatacaatcctcatacaagatgca
atgggtgaaaaggtgtcgaagctcatccaattcaccaccgctttctttggtggttttgta
attgccttcatcaaaggctggaagctcacgctagtgatgatgtccgtgatgcctctgctc
gtttttgctggagggatgatggccaatctcatgtccaaaatggcgagtcgaggccagaaa
gcttacgccgaggcggcagttgtggtggaacaagtcactggaggcatcagaactgtggct
tcgtttactggcgagcgtaagtccatggctgactacgagacagcacttacgaaagcgtac
aaagctggagtttttgaaggagtcgcatcgggagctggccttggtttcacgctgttcacc
atgttttccagctatggtctagcgctgtggtacggatcaaagctggttttaaacggtgga
tactcgggtggagatgtcatcagtgtcttgtttgctgtgctcaccggaggcatgtctttg
ggacaaacttcacccagtattactgcgatagcatccggaagagctgcagcttacaagatg
ttcgaagtcattcgtcgagtccctctgattgatgcctttgacatgagcggacaaacacta
gagagtgtgaagggcgatatcgagcttcgggacgtcaccttttcgtatcccacacgtcca
gatgtcccggtgtttacgagcttcaatctggaaatcccgtctgggacaacagttgctttg
gtcggggagagtggcagcggcaagtcgacggtgataagcttgatcgagaggttttatgat
cctcaggctggcgaggttttgatcgatggtgtcgacatccggaagctccagccgaagtgg
ctacgccaacagatcggactcgtcagccaggaaccggttttgtttgcaacctccatcaga
gagaacattgcttatggcagagagggagcgactgaggaggagattatggaagctgctcgc
cttgcgaacgctgcgaagtttatcagcaagatgccaaagggattcgacacacaagttgga
gagcacgggactcagctttctggcggacagaagcaaagggtggccatcgctagagctata
ctaaaaaatcctcgcattcttctgctggacgaggcaaccagcgctttggatgccgagtcg
gagcgagtggtgcaggaagcattggaccggatcatggtgaacaggacaacagtgatcgtc
gctcacaggctttccacgatcaaaaacgcagactgcatcgctgttgttcaaagaggaagc
attgtggagaaagggacacactcggaacttattcagaggccagatggagcttacgaacaa
ctagttcgtctccaagaaatgcacgaggtgaagtcaaaccagagcttgagcgctgctcaa
gcaatcgatccagacgaggtggtagtaatcgatcaagagctggatgaacgaaggctgagc
aggagtagcagccgtggatcgtttggaagcaaacgcaacgtaactcgaagttcgttctcc
ttgactagaacggcgagtgtcgatccagagcaggccgacaagagcgacggaaaaacagga
gtaacccggaacaactttcttcgcctcgcagctatgaacaagccagaaacaccggttttc
atcgttggagctcttgcttccactgcaaacggtgtggtgtttccggtcttcggcctgctt
ctgtccaacattttcggagttttgtacagcacgaaccggcacaagctgagacacgacgcc
aacttctgggcgagcatgttcctggtacaagcttccgcgtgcttgatcatctctcccata
caactcagcgccttcggattcatcggccagagactcattcgacgagtccggaagagatcg
ttcgagtccgtcgttcgtcaggagattgcctggtttgacgatccgtccaattcaagtgga
gcaatcagttcccggctctcagtagatgctgctcatgtcaagagcatggttggcgattcc
ttgtcgctgctgctgcaaaatctggcgtcactcattgcagggctcgtcatcgcgttcact
gcaaactggatattgtcacttgttgtcttggcacttattccactactcggagctcaaggc
gtagtccagaccaagatgatgatcggtttcagcaaagatgcgaaggtcatgtatgaagag
gccacaaaaatcgcaaacgatgcagtgagcagcattcgtactgtgagctcttactgcctc
gaagctaaaatgctggagctttacaaaacaaagtgctccatcccaaccaggaacgggatt
cgcaacggagttgtgagtggaatcggtctcggcctttcgagcttcgttatgttcgcagcc
tatgccttcagcttttggtttggagctcgtcttgtcagggagggcaaaacaagcttccaa
aacgtgtttaaggtgttctttgcgatcacgatgagcgcattcggcatagctcagggagtg
tcgctcgcccccgactttgcaaaggtgaaagcgggagtgaactcgatcttcgcgactctg
gacaggaaatcaaagatagatccttccaacgaggaaggcaagacgctggaatcgactcgc
ggagacatcgagttccggaacgtgagattccgctatccagcgcggcacgaggcggagatc
ttccgaaacttgagcttctccatccccgcgggcaagaccatggcgctggtcggcgagagt
ggaagcggcaagtccacagtcatctcgctactggagaggttctacgacccagattcgggc
agcattctcatcgatggcgttgacattcgatcgctcaagctacgctggctccgacaaaac
atcgccctggtcagccaagagcccacactgtttagcggcagcatccggtccaacatcgcg
tatgggaaagagagcggcgcgcccgtgagcgaggaagagatcaccgcggccgccaaggcc
gccaacgcgcacagcttcatctccgcgatgccgggaggatacgagaccgaggtcggggag
aggggaatccagctctcgggcgggcagaagcagcggatcgcgatcgcgagggcggtgctc
aaggagcccaagatcttactcctggacgaggcaacgagcgcgctggatgcagagtcggag
aggctggtccaggaagcgctggatcggatcatggtgggcaagacgagcgtggttgtggcg
catcgattgtccacgattgtgggcgtggacatgattgcggtggtgaagaatggagggatt
gtggaacagggcagccacgaggagctcatcacaaagcccaatggcgcctacgctacgctg
gtcaagctccatcgccacaagccagcaagctag
DBGET
integrated database retrieval system
