Selaginella moellendorffii: SELMODRAFT_123936
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Entry
SELMODRAFT_123936 CDS
T01496
Symbol
PGP4C-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_123936 (PGP4C-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_123936 (PGP4C-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_123936 (PGP4C-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_123936 (PGP4C-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_123936 (PGP4C-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_123936 (PGP4C-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_123936 (PGP4C-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_123936 (PGP4C-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_30
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_15
DUF87
AAA_21
APS_kinase
DUF815
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
9649227
NCBI-ProteinID:
XP_002986279
JGI:
123936
UniProt:
D8SSG7
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MDHPKKAGDRSVAFYKLFSFADGLDLFLMLLGSFGAVGNGIAMPLMTIIFGQLTNAFGES
AGNTSQVVDTVALRFLFLGCGSAIAALLELCCWMCTGERQAARIRSLYLKAILRQDIPFF
DTETNTGEVMSRMSGDTILIQEAMGEKVGKFIQLSTTFLGGFVIAFVKGWRLALVLLSVI
PLLVATGGAMAILTSRMATRGQMAYAEAGTLVEQIVGGIRTVASFGGEKQAVGKYDKALD
KAYRAGVRQSVVAGAGLGALLCVVFGSYAFALWYGSKLILHRGYTGGDVLNVIFAVLTGG
SSLGQASPCISAFAAGRAAACKMFEAIHRKPSIDASDMGGLTPDRVIGDIELRSVSFRYP
ARPEVAVFDNFSLAIPSGITAALVGESGSGKSTVVSLIERFYDPQAGAVLLDGIDVRRLQ
VKWLREQIGLVSQEPVLFGASIKDNISYGKDDATDEEIKRAAALANASKFIDRMPQGYST
HVGDHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQDALDGIMVHRTT
VIVAHRLSTIKNANCIAVVQRGNVVEKGTHSELLQKPDGAYSQLVRLQEQHDERSNHSLA
KVDPDEIVEQSGPQRSLSRASSSRGSFGSRLLRSFSAAARAAIEENANNKSEEEKPQMTR
AFLRLAALNKPEAPLAVAGGLAAAGHGVLFPLFGLLLSNMIGTFFETSRHKLRKDVDFWS
AIFTALAAACLIVVPAQIASFGLIGQRLIRRIRRQSFGAVVRQDIGWFDDPSNSSGAISA
RLSTDAAYVRSLVGDSMSLAAQNVATIVTGLIIAFAANWTLALLILALVPLLALQGATQT
KMMTGFSKNAKETYQDATKVANDAVSSIRTVASYCMEQKMVRLYTQKCEVTSKSGIRNGM
VSGAALGFSNFVLYGSYALSFWYGARLVEEGKTTFQKVFRVFFAITMSALGVSQAVTLAP
DLVKVKASVRSIFATLDRKSKIDPFNAEGKALEGMKGDIEFRHVSFRYPSRPDAQVFRDM
CFSLEAGKTMALVGESGSGKSTVIALLERFYDPDSGEILIDGINIKTMSLRWLRQHIGLV
SQEPILFSGTIRSNIAYAREGRVAEEEIEAAATTANAHKFISALPDGYNTQVGDRGMQLS
GGQKQRVAIARAVAKEPRILLLDEATSALDAESESVVQEALDRIMVGKTTIIVAHRLSTI
VGVDVIAVVNNGVIVERGSHSQLMSKPNGAYASLVKLHLSSPAK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccaaagaaggcgggcgaccgtagcgttgcattctacaagctctttagcttc
gcagacggcttggatttgttcctcatgctcctgggatcctttggcgccgtggggaacggg
atcgcaatgccactcatgaccatcatctttggccaactgacaaacgctttcggggaatcg
gcaggaaacacgagccaagttgtggacaccgtggcgctgcgtttccttttccttggctgt
ggatctgctattgcggctctcctggagctgtgctgttggatgtgcacgggagagcggcaa
gcagctcgtatcaggagcctgtatctcaaggccattctgcggcaggacatcccattcttt
gacacggagaccaacacaggcgaggtgatgagccggatgtctggtgacaccatcctcatc
caagaggccatgggggaaaaggttgggaagttcatccagcttagtacaaccttcttgggt
ggcttcgtcattgcatttgtcaagggctggcgcttggcactcgtcctgctctcggtcatc
cctttgctcgtcgccactggcggtgcaatggccattctcacgtccagaatggcaactaga
ggacagatggcctatgccgaggcaggaactctcgtggagcagattgtcggtggcatcaga
actgttgcgtcttttggtggcgaaaagcaggctgtgggcaagtacgacaaggcgcttgac
aaggcgtaccgagctggagtccggcagagtgttgttgcaggagccgggctcggagctctc
ctgtgtgtggtgttcggcagctatgcatttgcactgtggtatggatcaaagctgatactg
catcgaggctacacgggtggtgacgtcctcaatgtcatcttcgcagtactcacgggcgga
tcgtccctgggccaggcttcaccttgtatcagcgcgtttgctgcgggaagggcagcggca
tgcaagatgtttgaagccatccacaggaagcctagtatcgatgcgtcggacatgggtggc
ctaacgcccgaccgagtgattggtgacattgagctccgcagcgtgagcttcagatatccc
gcgcgcccggaggtagccgtctttgacaatttctctctggccataccatccggcataacc
gctgctttggtgggggagagcggtagcggcaagtctactgttgtcagcttgatcgagagg
ttctatgatccacaggctggggcggtccttttagacggcattgacgtacgccgtctgcaa
gtcaaatggctgcgagaacaaattggcctcgtaagccaggagccggtactctttggtgcc
tctatcaaggacaatatatcctatgggaaagatgacgccactgacgaggaaatcaagcgc
gctgccgctcttgcaaacgcttccaagttcatagacaggatgcctcagggttacagcacg
cacgttggagatcatggaacacagctttcgggaggccagaagcagaggatcgcaatcgcc
agagctatcctcaagaacccccgcattcttctccttgacgaagctaccagtgctctggat
gccgagtcggagagggttgtccaggatgctctggacggcatcatggtgcaccggacaact
gtcatcgtagcccatagattgtctaccatcaagaacgcaaactgcatcgctgtggttcag
cgaggaaacgtggttgagaaaggcacacactcggagctgctacagaaaccggatggcgcc
tactcccagctggtgcgcctgcaagagcaacatgacgagagatccaatcacagcctggcc
aaagtggacccagacgagatcgtcgagcagagcggccctcaaagatctctaagcagggct
agcagcagtcgcggctcgtttgggagcagacttctgagaagctttagtgctgctgcaaga
gcggccatcgaggagaatgccaataacaagagcgaggaagagaaaccacaaatgacgcgg
gcatttcttcgtctcgcagccttgaacaagcccgaggcgccgctggccgttgccggtggg
ctagccgccgctggacacggtgtgctatttccactctttgggctgcttctgtccaacatg
atcgggacgtttttcgagacgagcaggcacaagctacgaaaggatgtggatttctggtcg
gccattttcacggctctggcagcggcatgtttgattgttgttccggcacagatcgcgtct
ttcgggttaattggccagcgcttgattcgacgcatcaggaggcagtcgtttggtgcggtt
gttcgccaggatatcggttggttcgacgatcccagcaactccagtggagctatcagtgct
cgtttatcaaccgacgcagcttacgtccgaagcctggtcggagactccatgtcgttggct
gctcagaatgttgcaaccattgttaccgggttgataatcgccttcgctgcaaactggacg
ctggctctgctaatccttgcattggtccctctacttgcccttcagggcgcaacacagacg
aagatgatgactggttttagcaagaacgcaaaggaaacatatcaagatgcaaccaaagtt
gcaaacgatgctgttagtagcatccgcacagtggcgtcgtattgcatggagcaaaagatg
gtcaggctttacacgcaaaagtgtgaagttacgtccaagagtgggatacggaacgggatg
gtgagtggagctgcgcttggtttttcaaacttcgtactctatggctcgtatgcactcagt
ttctggtacggagctcgtctagtggaggaaggaaagacgacgtttcagaaagttttccgg
gtgttttttgctatcacaatgagtgctctgggggtttctcaggccgtgacattggctcct
gatctggtcaaagtgaaggcctcggtcagatcaatttttgcaaccctcgacaggaagtct
aagattgatcccttcaacgccgaaggcaaggcgctggaaggaatgaaaggcgacatcgag
ttccggcatgtgagcttcagatacccgtcacgtcctgatgcgcaagtgtttcgtgacatg
tgcttctcactggaagctggaaagacaatggccctggtaggggaaagtggcagcgggaag
tcaactgtcatcgctctcttggaaagattctacgatcctgatagcggcgagatactcatc
gacgggatcaacatcaaaacgatgagcctgaggtggctacgccaacacattggactggtg
agccaagaaccaattctgttcagcggcaccatacggtccaacattgcgtatgcaagagag
gggagggtggcggaggaggaaatcgaggccgcagcaacgaccgcaaacgctcacaagttc
atctcggccttacccgacggctacaacactcaggttggcgaccgcggcatgcagttgtct
gggggacagaagcagcgagttgccatcgccagagccgtggccaaggagcccaggattctg
ctgctggacgaggcaaccagtgccttggatgcggaatctgagagcgttgtccaggaggca
ttggacaggatcatggttggcaagacaacgataattgttgctcaccggctgtcaacaatt
gttggcgtggacgtgatcgccgttgtgaacaacggggtgattgtggagcgagggagccat
tcccagctcatgagcaagcccaatggagcttatgcctcgctggtgaagctgcatctatca
tcgccggccaagtag
DBGET
integrated database retrieval system
