Selaginella moellendorffii: SELMODRAFT_124676
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Entry
SELMODRAFT_124676 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_124676
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_124676
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_124676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
T4SS-DNA_transf
AAA_19
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
9641524
NCBI-ProteinID:
XP_002986837
JGI:
124676
UniProt:
D8SU04
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
LKKKLKIRAAGDNVPQPLRSFQQLSSEYDCEPNLIKNLVEAGYKEPTPVQRQVIPVLLQE
RECFVCAPTGSGKSLAFILPILMKLKKSSPDGIRAVILCPTRELAAQLITECRRLANGSK
IRARLLTKRLFKNPDFASLRCDILVSTPLRLDKLVKSEKIDLKRVEYFILDESDKLFELG
FMQQIDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAIRIVIGDRNSASETVQQKL
MYAGNEEGKLLALKQFFKEGLSPPIILFVQCKERAKQLHKALLSEKLRVDSIHADRTQTQ
REIAVLNFRTGKTWILIATDLMARGMDFKGVNWVINYDVPQDTTVYIHRIGRSGRAGRPG
NALTLYAEEDVPLLRSIANVMKASGCDVPEWMLSLPKIRKRNQKRIRRQPVGASA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ctgaagaaaaaacttaagattcgtgctgccggtgataatgttcctcagcctctcaggagt
ttccagcagcttagctcggaatacgactgtgagccaaatttgataaaaaacttggtggaa
gccggctacaaggagccaacaccagtgcaaaggcaagttattccggttctccttcaggaa
cgcgaatgttttgtctgtgctcccactggttctggcaaatctttggcattcattctgccg
atcttaatgaaactgaagaagtcgagcccagatggtatcagagcagtgatcctgtgtcct
acacgtgagttggcggcacagcttatcacggaatgtaggaggctagcaaatggcagtaag
atccgtgcgagattgctgacaaaaaggctttttaagaacccggattttgctagccttcgc
tgtgatattctagtatcaacgcctctacgcctggataagcttgtcaagtcggaaaaaatc
gatttaaaacgtgtcgagtattttatcctggatgaatccgacaagctttttgagcttgga
tttatgcagcaaatcgattctatcgtgagcgcctgcacccggacaaacattgtgagagca
ttattcagtgcaacactgcctgagacagtggaggaacttgcaagaaccattatgcacgat
gccattcgtatcgtgatcggagataggaattcagcttctgagacagtccagcagaagctc
atgtatgctggtaacgaggaaggcaaattgttagccttgaaacaattcttcaaggagggg
ctttcaccaccgatcatactcttcgtgcaatgcaaggaacgggcaaaacagcttcataaa
gctttgttgtcagagaagcttagagtggacagtattcatgcggatcgcacgcaaacacag
cgtgagattgctgttcttaactttcgaactggcaagacatggattctcatagcaacagat
ctaatggcacgaggaatggatttcaagggcgtgaactgggtcataaactacgatgttccc
caggatacaacagtgtacattcatcgcataggacgcagtggtcgagctggccggccagga
aatgctttgacactgtatgccgaggaagacgttccattgctgcggtctatcgccaacgtc
atgaaagcttctggctgtgatgtgcccgagtggatgctttccttgcccaagattcgcaaa
aggaaccagaagcgtatccggcgacaaccagtgggagctagcgcgtga
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