Selaginella moellendorffii: SELMODRAFT_124933
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Entry
SELMODRAFT_124933 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_124933
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SELMODRAFT_124933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_DCAF12
PEP5_VPS11_N
Beta-prop_WDR75_2nd
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
9642478
NCBI-ProteinID:
XP_002986979
JGI:
124933
UniProt:
D8SUE9
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
SQVWRPGVDTLEKDEELQFDPSTYDCLHAFHLGWPCLSFDIVRDTLGALRHEFPHTMFCV
AGTQADASTSNTIAIVKLSNLTGKKRSPNAVSNDESGSESDDSEDEQDQETPTPAPDESS
KIPKLEERMVPHQGCVNRIRSMPQQPHIVASWSAEGFVQMWDFSSQLNAVATNNDAGSSK
RTSHPPLQICKAHKDEGFAMDWSPMTPGRFLSGDCKGVIHFWEPMPGGRWNVGNAHCLGH
SRSVEDLQWSPSEENVFASCSVDKTIGIWDLRSRRKELSVKAHDTDVNVISWNKNKSASC
LLASGSDNGVFRVWDLRAFKEDSAVAHFTHHSSYITSIEWSPHEESTLAVASADNQLTIW
DVALERDTEEEAQYQMELGQEQAAAPENLPAQLLFGQKDMKEVHWHPQIHGLLVSTAGDG
FNVFRPCNL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
tcccaggtatggcgtcctggagttgatacgctggaaaaggacgaggaattgcaattcgat
ccatctacttatgactgccttcacgcatttcacttgggatggccgtgtttgagctttgac
atcgtgagagatacactgggagctttgcgacatgaatttcctcacacgatgttttgcgtg
gccggaacacaggcagatgcgtcgaccagcaacacaattgccatcgtgaagctgtccaac
ttgactggaaagaaacgatcgcccaacgctgtttccaacgacgagagtggaagcgagagt
gacgatagcgaggatgaacaagaccaagaaacgccaacgcccgcaccagacgagtcgagt
aaaattcctaagctggaggaacgaatggtgcctcaccaggggtgtgtgaatcgcatccga
tccatgccacaacaacctcatattgttgcatcatggtctgctgaaggctttgtccagatg
tgggacttttcgtcccaacttaatgctgtagctacaaacaatgacgctggaagcagcaaa
cgtacctcccatcctcctcttcaaatatgtaaagcgcataaagatgaaggttttgccatg
gattggagcccgatgactcccggacgtttcctttctggggattgcaagggagtgatccat
ttctgggagccgatgcctgggggaagatggaacgtggggaacgcgcattgccttggacat
agtcgcagtgtggaggacttacagtggagtccttcagaggaaaatgtgtttgcttcttgc
tcagtggacaaaaccattggtatttgggatttacgatctcgaagaaaagagctgtctgta
aaagctcatgacacagacgttaacgtcatctcctggaacaaaaacaagtcggcatcctgc
ctactagcatcaggaagtgacaatggcgtcttccgcgtgtgggatctccgggcgttcaaa
gaagattccgccgtggcgcacttcacgcaccatagttcgtatatcacgtcgatcgaatgg
agcccccacgaagagtccactctggctgttgcctctgcggacaaccagctaactatctgg
gacgtagcgctggagcgtgataccgaggaagaggctcaataccaaatggagctgggacag
gagcaagcggcggctccagagaacttgccggcccaactgcttttcggacagaaggatatg
aaggaagtgcactggcatcctcaaattcacgggcttttggtttctaccgctggcgatggc
tttaacgtgttccggccttgcaacttgtag
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