Selaginella moellendorffii: SELMODRAFT_125427
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Entry
SELMODRAFT_125427 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
smo04141
Protein processing in endoplasmic reticulum
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_125427
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_125427
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_125427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_125427
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_125427
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_125427
03110 Chaperones and folding catalysts [BR:
smo03110
]
SELMODRAFT_125427
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_125427
03051 Proteasome [BR:
smo03051
]
SELMODRAFT_125427
03029 Mitochondrial biogenesis [BR:
smo03029
]
SELMODRAFT_125427
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_125427
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
SELMODRAFT_125427
Spliceosome [BR:
smo03041
]
Complex B
Other components
Prp19 complex
SELMODRAFT_125427
Complex C
Prp19-CDC5 complex
SELMODRAFT_125427
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SELMODRAFT_125427
Chaperones and folding catalysts [BR:
smo03110
]
Heat shock proteins
HSP70 / DNAK
SELMODRAFT_125427
Membrane trafficking [BR:
smo04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
SELMODRAFT_125427
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
SELMODRAFT_125427
Proteasome [BR:
smo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
SELMODRAFT_125427
Mitochondrial biogenesis [BR:
smo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
SELMODRAFT_125427
Exosome [BR:
smo04147
]
Exosomal proteins
Proteins found in most exosomes
SELMODRAFT_125427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
NPA
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
9656754
NCBI-ProteinID:
XP_002987209
JGI:
125427
UniProt:
D8SUZ7
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSSTAPAVGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
ALNPSNTVFDAKRLIGRKFSDPSVQADMKLWPFKVIAGPSDKPMIVVTYKNEQKQFSAEE
ISSMVLTKMKEIAEVFVGKSVKDAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKKSSSTGEKNILIFDLGGGTFDVSILTIDQGVFEVKATAGDTHLGGEDFDNR
MVNFFAQEFKRKYRKDISDNARALRRLRTACERAKRTLSSTSQTTINVESLYEGIDFNAS
ITRARFEELCMDLFRKCMEPVEKCLKDSKMDKGSIHDVVLVGGSTRIPKVQQLLQDFFNG
KDLCKSINPDEAVAYGAAVQAAILSGVEHEKVQEVVLLDVAPLSLGLETAGGVMTTLIPR
NTTIPARKEQIFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITV
AFDMDANGILNVSAEDKTTGKKNKIVITNDKGRLSKEEISKLVQEAEKFKAEDDEARKKI
DARNALENYAYNMRNTIRDDNVAGKLDPADKKKIEEAINKTIEWLDANQLAEVEELEDKQ
KELEGICNPVIARMYQGGGGAAAGGAAPGGGAGFGGGSGGSDGPGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacagcgccagcagtcgggatcgatctgggcacgacgtactcgtgcgtcggg
gtttggcagcacgatcgagtggagatcatcgccaacgatcagggcaaccggacgacgccc
agctatgtcgccttcacggacacggagcggctcatcggcgacgccgccaagaaccaggtc
gcgctcaatccctccaacaccgtcttcgatgccaagcggctcatcggcaggaaattcagc
gatccatccgtccaggcggacatgaagctgtggcccttcaaggtgatcgcggggccgagc
gacaagcccatgatcgtggtgacttacaagaacgagcagaagcaattctcggccgaggag
atctcctccatggttctcaccaagatgaaggagatcgcggaggttttcgtgggcaagagc
gtcaaggacgcggtggtgacggtgcctgcctatttcaatgactcgcagcgccaggctacc
aaggacgctggagtgatcgcgggtttgaatgtgctgaggatcatcaacgagcccaccgcg
gcggccatcgcctacggcctggacaagaagtcgtcgagcaccggcgagaagaacatcttg
atcttcgacctgggcggtggaactttcgatgtctcgatcctcacgatcgaccagggggtg
ttcgaggtcaaggccacggccggagacacgcacttgggtggcgaggacttcgacaacagg
atggtgaacttcttcgcgcaggagttcaagcggaagtaccgcaaggacatcagtgacaac
gccagagcgctgcggcgattgaggacggcctgcgagcgagccaagcggacgctctcgtcc
acgtcccagacgacgatcaacgtcgagtcgctgtacgaggggatcgacttcaacgcgagc
atcacccgggccaggttcgaggagctgtgcatggatttgttccgcaagtgcatggagcca
gtggagaagtgcctcaaggactcgaagatggacaagggatccatccatgacgtggttctc
gtcggcggctccacccggatccccaaagtccagcagctactccaggacttcttcaatggc
aaggacctgtgcaagagcatcaacccggacgaggcggtggcgtatggcgcggcggtccag
gcggcgatcctcagcggcgtggagcacgagaaggtgcaagaggtggtgctcctcgacgta
gctccgctctcgctgggactggagacggccggaggagtcatgacgacgctcatcccgcgg
aacaccaccattccggctaggaaggagcagatcttctcgacgtactcggacaaccagccg
ggcgtcttgatccaggtgttcgagggcgagcgtgctcggacccgagacaacaatctcctg
gggaagttcgagctctccggcattcctccggctccgaggggtgtcccgcagatcacggtg
gcgttcgacatggacgccaatggtatcctcaacgtctcggcggaggacaagacgaccggc
aagaagaacaagatcgtcatcacgaatgacaaggggcggctgagcaaggaggagatcagc
aagctcgtccaggaggcggagaagttcaaggcggaggacgatgaggcgaggaagaagatc
gacgccaggaacgcgctggagaactatgcgtacaacatgaggaacacgatccgggacgac
aatgtggccgggaagctggatcccgcggacaagaagaagatcgaggaggcgatcaacaag
acgatcgagtggctggatgcgaatcagctggcggaggtggaggagctcgaggacaagcag
aaggagctcgaggggatctgcaacccggtgatcgcgagaatgtaccagggtggtggtggt
gctgctgctggtggcgccgctccaggcggcggcgctgggtttggaggaggctcgggcgga
tccgatggcccggggcccaagatcgaggaagttgactag
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integrated database retrieval system
