Selaginella moellendorffii: SELMODRAFT_126010
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Entry
SELMODRAFT_126010 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_126010
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_126010
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SELMODRAFT_126010
DNA replication proteins [BR:
smo03032
]
Prokaryotic type
DNA Topoisomerases
SELMODRAFT_126010
DNA repair and recombination proteins [BR:
smo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SELMODRAFT_126010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
THOC7
Motif
Other DBs
NCBI-GeneID:
9629259
NCBI-ProteinID:
XP_002987395
JGI:
126010
UniProt:
D8SVR4
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MERKAAATGDGGAAVAVHNDRTLLVELHKEASESYLSYAMSVIVGRALPDVRDGLKPVHR
RILYAMNELGLASKKPHRKCARVVGEVLGKFHPHGDTAVYDALVRLAQASYTLFFSSFIS
FSLRSPLISGHGNFGSLDGDPAAAMRYTECRLHPLSEAMLLADLDLDTVDFIPNFDGSQK
EPVVMPARLPNVLINGASGIAVGMATNIPPHNLSEVVDALCALIKNPNATVEELMEHLPG
PDFPTGGQILGISGIADAFRTGRGTITVRGKADFEELEGKISRSAIIITEIPYGTNKSTL
VAKIAELVNSKTLEGVSDIRDESDRAGMRIVVELKRGAVAAVVLNNLYKHTALQSRFSYN
LVGILNKEPEVFSIKRLLEIFLDFRCSVVQRRAQCELTRAEARDHLLEGFLKGLDKLDDV
VKVLKSAKDSASAMQALQKDFELSAAQAEALLGMPLRRITSLERNKILEEHNSLLAQASN
LRELLSNKQRVLRVVEKEALALKNEFGSPRRTVLEEDGDGRIDNIDVIPNNESFLTLSEK
GYIKRMQPDTFLAQRRGTTGKSGAKMKSNDGMVDSFMCRNHDHVLVFSERGVVYSFRAYQ
VPECSRTSAGVPIIQVLSIPAGERITSIFPLSEFREDHFLVMLTSKGYIKRTELPAFSSI
RPQGIVAIQLMEGDELKWVRLATQSDRIFIGSRNGMAMQAPCEFRSMRRGARGLRAMRIK
EGDEIAAIDIVPGSVWKESPTLLCTHVLCKRSKASEAPWLLFVSENGMAKRVPITSFPRH
GLNKVGVIGCKFVPGDRLASMFVVGTSVSDGESNEEIVVGTQGGIFNRFKVREISIKSRM
GRGIKLMKLDVDDKVKSVSVVAASDSPAHDEPPSDSSQES
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaagcagcggctaccggcgatggtggagctgcggtggctgtgcacaacgat
agaacactcttggtggagctacacaaggaggcgtccgagtcatatctctcctatgcgatg
tccgttatcgttggaagagctcttccggatgtgcgcgatggtctcaagcccgtgcatcgc
cgaatactttacgctatgaacgagctgggtttagcgtccaagaaacctcataggaagtgt
gctcgtgttgttggcgaggtgcttggaaagtttcatccgcatggggacacagccgtgtat
gatgccttagttcgccttgcccaggcaagctatacacttttcttctcttcctttataagt
ttttcgctgcggtcaccacttatcagtggtcacgggaacttcggctcgctggacggtgac
cctgcggctgcaatgagatacaccgagtgtaggcttcatccgctttcagaagcaatgctt
cttgccgaccttgatctggataccgtcgattttattccaaacttcgacggatcacaaaag
gagccggtagtcatgcctgccagacttcccaacgttcttatcaatggtgcttccggaata
gccgttggcatggctaccaatatacctccgcacaacctctccgaagttgtggacgcactt
tgcgctttgataaagaatcctaatgcaactgtcgaagaactgatggaacatctgcctggc
ccagatttcccgaccggaggacaaattttggggatatcggggatagcggacgcttttaga
accggccgcggaacgattacagttagaggcaaagcagatttcgaggagctggaaggaaaa
atttctcgctcagctatcattattactgagattccgtatggtacaaacaagtctactttg
gttgctaagattgccgaactcgttaacagcaagacgctagaaggtgtaagcgacatcaga
gatgaaagtgaccgagcaggaatgcggattgtcgtcgagctcaaaagaggcgctgtggca
gctgttgttctgaataacctgtacaagcatacagctctgcagtctcgttttagctacaac
ctagttggtattcttaacaaggagccggaggtgtttagtatcaagagactgctggagata
tttctagattttaggtgttcagtagtccagaggcgagctcagtgcgaacttacacgtgct
gaagcaagggatcacttgttggagggttttttgaaaggattggacaagctggacgatgtt
gtgaaagtgttaaagagtgccaaggattctgcgagtgcaatgcaggcattgcagaaagat
ttcgaactatctgcagcccaggccgaagcccttttaggaatgccgctacggcgtataacc
agtttagagcgaaataagatactcgaggaacataatagtcttcttgcgcaggcctccaac
ttgcgtgagttgctctcaaacaaacagcgcgttttaagggtcgttgaaaaagaagctttg
gctttgaagaacgagtttggaagtccacgtcggactgtgctcgaggaggatggcgatggt
cgaatagataacattgatgtgataccaaacaacgagagtttcctgactctcagcgagaag
ggttacatcaagaggatgcagcccgacacctttttagcacaaaggcgtgggacaacaggc
aagtccggggccaagatgaaaagcaacgatggcatggtggattcattcatgtgcaggaat
cacgaccacgttctcgtattcagcgagcggggagttgtatactcctttcgtgcctaccaa
gtccctgaatgctcaaggacctctgctggtgttcccatcattcaggtgctctccatcccg
gcgggagaacgaattacttctatcttcccactcagcgagtttcgagaggaccattttctg
gtcatgctcacttccaaaggttacatcaaaagaacggaactgccagctttctcatccatt
cgaccacaaggcattgtggccattcagctgatggagggagacgagcttaaatgggtgcga
ctggccacccaatctgacaggatattcattggctctcggaatgggatggctatgcaggct
ccttgtgagtttcgttccatgcgaaggggagctcgtggtctaagggccatgcgcattaaa
gaaggtgacgagattgctgctatcgacattgttcctggatctgtatggaaagagagcccg
actttgctttgtactcacgttttatgcaaaaggagcaaagcaagcgaagctccttggttg
ctcttcgtctctgaaaacgggatggcgaagcgagtccctataacttccttccctcggcac
ggcttgaacaaagtcggggttatcggatgcaagttcgttcccggggaccggctcgcatcc
atgtttgtcgtgggaacgtcagtttcagatggagaaagcaacgaagaaatcgtagtcggg
acccagggagggatcttcaaccggttcaaagttcgcgagatcagtatcaagtcgcggatg
ggaaggggcatcaagctgatgaaactagatgtggacgacaaggtgaaatcggtctctgtg
gttgcagcgtcggattctcccgctcacgacgaaccaccatccgattcatcgcaggaatcg
tag
DBGET
integrated database retrieval system
