Selaginella moellendorffii: SELMODRAFT_128137
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Entry
SELMODRAFT_128137 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_128137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_128137
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_128137
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_128137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
HIRAN
FAN1_HTH
TPR_7
Motif
Other DBs
NCBI-GeneID:
9638577
NCBI-ProteinID:
XP_002988561
JGI:
128137
UniProt:
D8SYT0
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MNFSSTAILVWILLCFDSSTLIDGVSCPDTCLQRGKKKKNSVQHTLFHFNLSKKVEYEES
GNCVLEIQQSPPLETGVDCNTAAGSPEPEVSSTLECFEEPDVANSVLPAELNSETRDLYN
GCLEARIAGRKYHRDVECQAGMRVHLVREPENPMDTYAVKVLTADGLSLGHIPKELSRYL
SPLMEKGVVDVQGYVSKSTSEAARLKLDLREIQSRTIGSLSEEKVLAVKWSRLMDAADKG
QDHGCRYQQNFLYMLQVVLERDLHLFTSDEIELLEAFRSISSDGQRLFVRLAQRKGPWFR
LQNIFYEDIGDTNSAVHELVGTQFLSSFFDADVNSSELLEHLTVQELKDLAVNSKIMVVT
SKTFFLVFISVPAYRSKREILGGSNLTALIREATGPCIRIAETVEVLLWRLQRLFFLNGE
QEFHVFLLVDIGRIKYPSYRCARTMPVFASREDFLAYEQALQLAQVVDMSLEAGNSEAVN
SSFRKARTTLELINAHTEIKHPFLARFSAAWVYATICTVAASFLEKERRYAEAINLFKQL
LSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENGLNDFSVRGGDRIALQRRVLRLGK
PPRRWKVPPYAALLKKKQKVVTIMGRPLNNANGMKSRFYGYDGQQCSVEDLALQYYAGED
GGGWKGVHSESGIWLTLFGLLMWDVIFSDVPDVFQTPFQVLVSFSRGCSTVLVCRLHHWT
CARIHSIQSEARLLNLVFKPYAMAELGNSWLRLGQSTTGHHVAG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcgtcaactgccatcttggtttggattttgctctgttttgattcaagcacg
ctgatcgatggtgtctcttgtccagatacttgcctgcaacgtgggaagaaaaagaagaac
agtgtccagcatacactctttcacttcaacttgtcgaaaaaggtagagtacgaggaaagc
ggaaactgcgtactagaaatccagcagtctcctccgctcgagactggggtcgactgtaac
acggcggcagggtctccggaaccggaagtttcttctactcttgaatgctttgaggagccc
gacgtggccaacagcgtccttccggcagagctcaacagtgaaactagagatctttacaat
ggctgcctggaggcaaggattgctggccgcaagtaccacagagacgtcgagtgccaagct
gggatgcgagttcacctggtaagggaaccagaaaatcccatggatacatacgctgtgaag
gtgcttacagcggatgggctttcgctgggacatattccaaaagagctttcgcgttatttg
tctcctctcatggaaaaaggcgtggtagacgttcagggatatgtctccaagagtacatcg
gaagctgcacgcctcaagcttgatttgcgtgagatccagagtcggactattggaagtctc
tcagaagaaaaagtgctggctgtcaaatggagccgtctgatggatgcagctgacaaggga
caagaccacggctgtcgataccaacagaattttctctacatgctccaagtggtattggaa
cgggatctccatctctttacttcagacgagatcgaacttctcgaggcatttcgttcaatc
tcgtctgatggacagcgcctttttgtaagattggctcaacgaaaggggccatggttccgt
cttcagaacattttctatgaagatattggtgacacaaactctgcagtccatgagttagtc
ggtactcaatttctttcatcgtttttcgacgcggacgtcaattcgtctgagttgcttgaa
catctgactgtacaagagctcaaagatttggcagtgaacagcaaaatcatggtagttact
tctaagactttcttccttgtttttatttctgttcctgcttacagatcaaaacgtgaaata
cttggcggcagtaatctaacggctttaattcgtgaagcaaccggcccatgcattcgaata
gccgaaacagttgaagttctactttggcgtttacagaggctgttctttctaaacggtgag
caggagttccatgtttttcttcttgtggatattggaaggatcaagtatccaagctatagg
tgcgctagaacaatgccagtctttgcttctcgagaggactttctggcgtatgagcaggca
ttgcaattggctcaggtggttgacatgtctctggaagctggtaattctgaggctgtaaac
tcctcttttcgaaaagcaaggactactctcgaattgatcaatgcacacaccgagatcaag
catccatttttagcacgattttcggctgcatgggtgtatgcaacaatctgtactgtggct
gcatcgtttctggagaaagaacgcagatatgctgaagctataaacctcttcaagcagctc
cttagcatgcagtattgtcctggacggagaggatactggactctccggctatctattgac
ttggagcacttacagcgtttagaagagagcctgctcgttgcagaaaacggattaaatgat
ttcagcgtccgaggaggggatcgtattgctttgcaacggagggttctccgactaggaaaa
cctcctagaaggtggaaagtacctccatatgcagcgcttttaaagaaaaaacaaaaggtg
gtgacgattatgggaaggccgctaaacaatgccaatggaatgaagagcagattttatggc
tacgatgggcaacaatgcagtgtggaggacctggcacttcaatactatgccggagaagat
ggaggcggctggaaaggagtccattcagaaagtggcatatggctgacattgttcgggctg
ctcatgtgggatgttatcttttcagacgttccagatgtcttccagacaccttttcaggtt
cttgtttcattttctcgtggttgctctacagttcttgtttgcagactgcaccattggact
tgtgcacggattcattctatccagtccgaagctcgcttattgaatctcgtcttcaagcca
tacgcgatggcggagctaggcaactcgtggctgagacttgggcagagcactacgggacat
catgtagcggggtaa
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integrated database retrieval system